prot_H-elongata_contig20003.5633.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20003.5633.1
Unique Nameprot_H-elongata_contig20003.5633.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length191
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20003.5633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..191
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 84..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20003contigH-elongata_contig20003:1026..3295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20003.5633.1mRNA_H-elongata_contig20003.5633.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20003 1026..3297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20003.5633.1 ID=prot_H-elongata_contig20003.5633.1|Name=mRNA_H-elongata_contig20003.5633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
ALYVITGLGIGPSTRFPKIIISTTMKLPSTARGSAASLKAAHHQRRLAFA
LSVGIFTCFAWEVMMSSWTTIPGPRRFFNDLPSLLMAVVCYVFAAFVRYS
VSEVAALTASVPSPVQVVVVVVAHTVIGLPLGLSAWQVAVARAGTNLAPA
LALQSGARGGLIAGGAACGVLSALHFFAESKHQLLVGLLPR
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