prot_H-elongata_contig19989.5625.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19989.5625.1
Unique Nameprot_H-elongata_contig19989.5625.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
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BLAST of mRNA_H-elongata_contig19989.5625.1 vs. uniprot
Match: A0A6H5JI60_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI60_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.950e-15
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:    1 MEWLLWASEGFNRSATAENGGWISPHEIFYGNRPSLSLLPCYQSAYHRVPQQHKMDPRARLCYFLNFGYNHEHDRHKLLGVEARKVVFSHDATW 94
            ME   WA++  N+SAT +N GW SPHE+F G +    +LP  Q  +    ++ K+D +A LCY+LN G NH     K+L     +VV++++ +W
Sbjct:  479 MESAKWAADALNQSATKDNPGWRSPHEMFTGEQGPFRVLPFIQPGFMHEDRRTKLDDQATLCYYLNGGDNHPSSTVKVLKASTGRVVYTNNVSW 572
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19989.5625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI60_9PHAE1.950e-1538.30Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19989contigH-elongata_contig19989:6500..6949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19989.5625.1mRNA_H-elongata_contig19989.5625.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19989 6500..6949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19989.5625.1 ID=prot_H-elongata_contig19989.5625.1|Name=mRNA_H-elongata_contig19989.5625.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MEWLLWASEGFNRSATAENGGWISPHEIFYGNRPSLSLLPCYQSAYHRVP
QQHKMDPRARLCYFLNFGYNHEHDRHKLLGVEARKVVFSHDATWHHPEAP
LIPPVTAVENPLTAPLEDIYVSIPAHVPNVAAPAPAPMPAPTMRPPPMSN
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