prot_H-elongata_contig19963.5613.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19963.5613.1
Unique Nameprot_H-elongata_contig19963.5613.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1085
Homology
BLAST of mRNA_H-elongata_contig19963.5613.1 vs. uniprot
Match: A0A6H5KST8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST8_9PHAE)

HSP 1 Score: 976 bits (2524), Expect = 0.000e+0
Identity = 641/1114 (57.54%), Postives = 722/1114 (64.81%), Query Frame = 0
Query:    1 DVSARKTLLRLSEATWADALVEMALCERDLDEPFAASGGSGAAASDHTAGISAKSAAVVTTGSPGGSWEAVESFGDGAVSTPLGERSVCEELALDAAGCLVADSIVERPRGWTILRPLLASMDRAAWQRVGTGRGGREWHRVSLCKLSATVMQRVARGSGKWSELTLDGLNKLMLLVEERLFPGEELAAAMAAAGAGGEFSVPPAAATMAAATASGAGVQAKGGGREGDVARVSPS----TAEMEGGWGEDGTTAGALSHLVECMLEIVRGLRGMLSSEPLPP-GHRAPAAAXXXXXXXXXGDAILRARALAALWPALRALGRVPCLRDVGTELSRVVYHEVFISLQVLLELPEVTPAAGKAATLEAFLSLRKALSVCDEDLSRPDPSTAGSSWGWGRRSTSWGRRKRANGPFDPDAAALAMEKRGLLGAVAMAAVQNLHKSVEAPDAKSPGMTPTRKSGNGSSNRGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSSKASMAVSEMLNDASDCADMDEIFESLATVLAVAQKESRQDFADFVPLFRNMGSGRRGIIPASTNRRRLAPSDYSPSRGSGGGRSGGGNTSSPTGRGAVEVHTFAHAPTSYSMPFGIPPPVHRTR---DASAEFAWPAEPASPHVPHTVPT-SAGTDEDAGVAAEMASTSGDSSTPGQVAAE------PPRGSLLFGLGGAANVAALSATCAGKHRTLVEEEHLRLEYAMAALDAAGARTRRHWRRVSRLSEAEAWAGEDEE-GVDXXXXXXXXXXXXXXXXXRLTGLHLECQWKLAGNEHEGQEPGRFRPVLQPVLSGTAPALARSAASS---QESLSASTMSAEDVGLQLARKCSRYIVDIVKTEAQGGDGAADTDVGGDAGGVMAGGVGGSATPTYDELDNDDVWGVIGPLTPELDLPSGVGVDCVDDSAADDAAAVAAGMSIGVVEEVSSTGESPAARLQREEEERRLVEERVRQTVAAVAANAGVGVVGEWGRGGPRVDLGPGAERWKRAVAVAGEAAA-LGATEMVVLVTPKGNRRGRLSLTDKFLSFLPENTGVDSISERGSVTGGGGGSG------------SKAYTWAVDQVSQL 1082
            +V+ARK LLRLSE++WADAL+E+ALCER+LD+PFAA  G+  AA    +G S K  +  + G  G  WE+VE FGDGAVSTP+GE S+CEELALDAAGC+VADSIVERPRGWTILRPLLAS+DRA  QRVG  R GREW RV+LCKLS+TV+QRVARGSG+W+ELTLDGLNKLMLLVEERLFPG+ELAA                            G+   GG  EG+   +  S    + +MEG WGEDGT AG+LSHLVECMLEIVRGLR MLS+EPLP  GHRAP AA XXXXXXXXGD  LR RA  ALWPALRALGRVP LRDVGTELSRVVYHEVF+SLQVLL LPEVTPAAGK+ATLEAFLSLRKALSVCDEDLSRPDPS +GS+WGWGRRSTSWGRRKRANGPFDPDAAALAMEKRGLLGAVAMAAVQNLH     P A++             + R +R                                        + KAS AV+EML  AS C DMDEIF+SL+ VLA AQ ESRQD+ADFVPLFRNMGSGRRG                                       A+  +  AH P SY+MPFG+PPP+HR R   DA  EFAWPAEP  PH P    T S+G  EDA                            PPRGSL+FGLGGAA   +L+AT   +HR +VEEEHLRLEYAMAALDAAGAR RRHWRRVSRL+EA          G +  XXXXXX         RLTGLH +C+WKLAGNEHEG EPGR+RPVLQPVL+  AP+ + S+++S    E LSAS MS EDVGLQLARKCSRYIVDIVKTEA G D  AD                             DVWGVIG L+P  D+           S  D+AA VAA  ++ VVEEVSSTGESP  R QREE+ERRLVE RVRQT+AAVA         + G  GPRVDLGPGA RW+ AVA+A EAA+ LG TE VVLVTPKGNRRGRLSL DKFLSF+PE+   D        TG  GGS             +KAYTWA DQV ++
Sbjct:  664 NVAARKALLRLSESSWADALIELALCERELDDPFAA--GATGAAEGAASGGSLKRPS--SRGGGGCGWESVERFGDGAVSTPVGETSLCEELALDAAGCVVADSIVERPRGWTILRPLLASLDRAVVQRVGLDRSGREWQRVALCKLSSTVLQRVARGSGRWTELTLDGLNKLMLLVEERLFPGDELAAXXXXXXXXXXXXXXXXXXXX---XXEAGGLGVAGGAEEGNRPVLGSSGGQSSFDMEGSWGEDGTAAGSLSHLVECMLEIVRGLRSMLSNEPLPATGHRAPVAAVXXXXXXXXGDVGLRTRACNALWPALRALGRVPVLRDVGTELSRVVYHEVFLSLQVLLSLPEVTPAAGKSATLEAFLSLRKALSVCDEDLSRPDPSASGSAWGWGRRSTSWGRRKRANGPFDPDAAALAMEKRGLLGAVAMAAVQNLHTL---PSAETAAAEDAAGDNAAETARDRRAEATGRPAPRQAKGGGAAPATATV----------------APKASAAVAEMLTGASGCEDMDEIFKSLSAVLAEAQAESRQDYADFVPLFRNMGSGRRGSXXXXXXXXXXXXXXX---------------XXXXXXXXALGGYASAHPPASYTMPFGLPPPLHRVRLFRDAG-EFAWPAEPPGPHGPPRPYTPSSGAGEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRGSLIFGLGGAAAAESLAATVLAEHRLVVEEEHLRLEYAMAALDAAGARARRHWRRVSRLAEAXXXXXXXXXVGEEKGXXXXXXATYRRAGGERLTGLHHDCRWKLAGNEHEGSEPGRYRPVLQPVLA--APSSSPSSSASVVPAEDLSASAMSMEDVGLQLARKCSRYIVDIVKTEATG-DALADAGXXXXXXXXXXXXXXXXXXXXXXXXXXXDVWGVIGALSPAADISGDPETAAAGSSGTDEAAIVAA--ALDVVEEVSSTGESPLTRAQREEDERRLVEARVRQTLAAVAGR-------QDGGAGPRVDLGPGAARWRMAVAIAAEAASGLGVTETVVLVTPKGNRRGRLSLVDKFLSFMPESATAD------GDTGRDGGSXXXXXXXXXXXXXAKAYTWATDQVERV 1717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19963.5613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KST8_9PHAE0.000e+057.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 954..974

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19963contigH-elongata_contig19963:173..6838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19963.5613.1mRNA_H-elongata_contig19963.5613.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19963 173..6838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19963.5613.1 ID=prot_H-elongata_contig19963.5613.1|Name=mRNA_H-elongata_contig19963.5613.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1085bp
DVSARKTLLRLSEATWADALVEMALCERDLDEPFAASGGSGAAASDHTAG
ISAKSAAVVTTGSPGGSWEAVESFGDGAVSTPLGERSVCEELALDAAGCL
VADSIVERPRGWTILRPLLASMDRAAWQRVGTGRGGREWHRVSLCKLSAT
VMQRVARGSGKWSELTLDGLNKLMLLVEERLFPGEELAAAMAAAGAGGEF
SVPPAAATMAAATASGAGVQAKGGGREGDVARVSPSTAEMEGGWGEDGTT
AGALSHLVECMLEIVRGLRGMLSSEPLPPGHRAPAAAVAAAAAAAAGDAI
LRARALAALWPALRALGRVPCLRDVGTELSRVVYHEVFISLQVLLELPEV
TPAAGKAATLEAFLSLRKALSVCDEDLSRPDPSTAGSSWGWGRRSTSWGR
RKRANGPFDPDAAALAMEKRGLLGAVAMAAVQNLHKSVEAPDAKSPGMTP
TRKSGNGSSNRGKRGGRKNARRGREGGDARGRGRGEATAAGKGYAGAAAK
TAVGSSKASMAVSEMLNDASDCADMDEIFESLATVLAVAQKESRQDFADF
VPLFRNMGSGRRGIIPASTNRRRLAPSDYSPSRGSGGGRSGGGNTSSPTG
RGAVEVHTFAHAPTSYSMPFGIPPPVHRTRDASAEFAWPAEPASPHVPHT
VPTSAGTDEDAGVAAEMASTSGDSSTPGQVAAEPPRGSLLFGLGGAANVA
ALSATCAGKHRTLVEEEHLRLEYAMAALDAAGARTRRHWRRVSRLSEAEA
WAGEDEEGVDGGGQGGWGEGGWRARGERLTGLHLECQWKLAGNEHEGQEP
GRFRPVLQPVLSGTAPALARSAASSQESLSASTMSAEDVGLQLARKCSRY
IVDIVKTEAQGGDGAADTDVGGDAGGVMAGGVGGSATPTYDELDNDDVWG
VIGPLTPELDLPSGVGVDCVDDSAADDAAAVAAGMSIGVVEEVSSTGESP
AARLQREEEERRLVEERVRQTVAAVAANAGVGVVGEWGRGGPRVDLGPGA
ERWKRAVAVAGEAAALGATEMVVLVTPKGNRRGRLSLTDKFLSFLPENTG
VDSISERGSVTGGGGGSGSKAYTWAVDQVSQLTQ*
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