prot_H-elongata_contig199604.5612.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199604.5612.1
Unique Nameprot_H-elongata_contig199604.5612.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length179
Homology
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 7.120e-32
Identity = 78/182 (42.86%), Postives = 106/182 (58.24%), Query Frame = 0
Query:    1 MVKAGRLLDDKKLTTHVGCAGHRLQSSAGVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASARE----YCAPRLDVCAEAQ 178
            MVKAGRLL++ +  TH+GC  HRL+S     F G GV++ALA AR+ +TRY  SSQA+ RL +      ++   V QDV TRW ST  S+ RLL LR+ I   E ++ I P L + DW +L+ V+   +P  + Q+  E    V+ SLVIP   DLRD L  A E    +  P   + AEA+
Sbjct:  126 MVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK 307          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 8.450e-29
Identity = 70/164 (42.68%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    1 MVKAGRLLD-DKKLTTHVGCAGHRLQSSAGVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASA 163
            M+KAGRLL+ D    +H+GC+ HR++S+   VF G  +  AL  AR  + RYK SSQ  ARL + C    ++P++V QDV TRW ST   V RLL L K I+  E ++ + P LSD DW +L  ++  L P    Q+  EG  YV+GS+ I    +LR+ L +A
Sbjct:  117 MIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAA 279          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 6.620e-27
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 0
Query:    1 MVKAGRLLD-DKKLTTHVGCAGHRLQSSAGVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASA 163
            MVKAGRLL+       H+GC+ HR++S+   VF G  +  ALA AR  + RYK SSQ + RL        + P++V QDV TRW S+   ++RLL L K I+  E  + I+P LS+ DW +L  ++  L P    Q+  EG  YV+GS+ +P   +LR+ L +A
Sbjct:  153 MVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAA 315          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: UPI001B88A203 (zinc finger BED domain-containing protein 4-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A203)

HSP 1 Score: 77.4 bits (189), Expect = 1.810e-13
Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 0
Query:   16 HVGCAGHRLQSSAGVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRK----VIRTDEV---LEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASARE 165
            H+GC  H L  +A      + V+R LA  R  ++ +  S+ ATA L ++    G+K + + QDVPTRW+S  D ++R LE++     V+   E+   + GIS +LS+ D  I E +   L P++ +  V   E   + S+++PL K L   +  ++E
Sbjct:  137 HIGCYAHTLNLAAQKGLKVNAVSRILARVRHVVSFFHRSTTATALLKEKTKQLGLKNVKLLQDVPTRWNSACDKLERFLEMQPAIYDVLVAKEIHSNVNGIS-TLSEADITIAEDIVACLLPLKAITTVLCTEKMPTVSIILPLQKKLLTSVLVSKE 292          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A835GBL2_SPOEX (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835GBL2_SPOEX)

HSP 1 Score: 75.5 bits (184), Expect = 9.280e-13
Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   16 HVGCAGHRLQSSA--GVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVD--AGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIR-TDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDL 156
            H GC GH L       ++F    +   L   +K +  YK SS A  +L K   D  A   P  + Q+VPTRW+ST   V R +EL + +R T  +L+   P +S+ +W +L ++   L+P         GE Y++GSLVI +T+ L
Sbjct:  106 HYGCYGHSLNLIVQDALIF----IQPLLEKVKKIVRHYKTSSTALEKLLKAQTDDKADCIPKRLIQEVPTRWNSTFQMVKRFVELEQYLRATMAILKKDLPIISNEEWLLLYEISKNLQPFDQATETINGEKYMTGSLVIVMTRCL 247          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A835G454_SPOEX (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835G454_SPOEX)

HSP 1 Score: 73.2 bits (178), Expect = 2.320e-12
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   16 HVGCAGHRLQSSA--GVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVD--AGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIR-TDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDL 156
            H GC GH L       ++F    +   L   +K +  YK SS A  +L K   D  +   P  + Q+VPTRW+ST     R +EL + +R T  +L+   P +S+ +W +L ++   L+P         GE Y++GSLVI +T+ L
Sbjct:   26 HYGCYGHSLNLIVQDALIF----IQPLLEKVKKIVRHYKTSSTALEKLLKAQTDDKSDCIPKRLIQEVPTRWNSTFHMFKRFVELEQYLRATMAILKKDLPIISNEEWLLLSEISKILQPFDQATETISGERYMTGSLVIVMTRCL 167          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: UPI001B88C6E0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C6E0)

HSP 1 Score: 73.2 bits (178), Expect = 5.920e-12
Identity = 44/147 (29.93%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   16 HVGCAGHRLQSSAGVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTDEVLEGISPSLSDV------DWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDL 156
            H+GC  H L  +A      + V+R LA  R+ ++ +  S+ A A L ++    G+K + + QDVPTRW+S  D ++R LEL+       V + I  +++D+      D  I E +   L P++ +  V   E   + S+++PL + L
Sbjct:  126 HIGCYAHTLNLAAQRGLKVNSVSRILARVRRVVSFFHRSTTAAALLKEKTKQQGLKNVKLLQDVPTRWNSACDMLERFLELQPAFYAALVAKEIRSNVNDISTLSEADITIAEDIVSCLLPLKAITTVLCTEKMPTVSIILPLQRKL 272          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A8N7W5P2_SPOFR (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A8N7W5P2_SPOFR)

HSP 1 Score: 71.6 bits (174), Expect = 2.440e-11
Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   16 HVGCAGHRLQSSA-GVVFTGDGVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTDEV-LEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASARE 165
            H GC  H L  +    + +   +   LA +R  +  +K S+QA  +L +    AG       QDV TRW+ST   + RL+E+++ I +    +     SL+  DW + E +   L+P   + R    +N+V GS+VIP+T+ L+  L +A +
Sbjct:  285 HFGCYAHTLNLAVTSAIESSPELNNLLARSRNIVAFFKRSTQAWEKLKRYQEQAGKIAKRPLQDVSTRWNSTFYMLQRLVEIKEEINSALCNMHSNVHSLTSYDWDVCEGLCKVLKPCEEVTREMSAQNFVCGSVVIPITRGLKTALENAED 436          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: UPI000B939146 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B939146)

HSP 1 Score: 68.9 bits (167), Expect = 2.000e-10
Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 0
Query:    8 LDDKKLTTHVGCAGHRLQSSAGVVFTGD-GVTRALANARKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIR-TDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASAR 164
            +++  L  H  C  H L  S      G+  + + L   R  +  +K SS A  +L +  +   +  + VKQDV TRW+S++  ++RLL+++  +  T   L      L+  +W IL      L+P  I+     GENY++ S +IPL + L+  + S +
Sbjct:  238 INEHLLKYHHPCVAHTLNLSINEAINGNLDIIQILKKCRTIVGHFKHSSYANGKLREFQLQMNLPILKVKQDVVTRWNSSLIMIERLLDIKNPLSATMSSLPRAPNCLNACEWEILLDCIHILKPFEIMTAELSGENYITISSIIPLIRGLQHIIKSVQ 396          
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Match: A0A6J2XDM4_SITOR (zinc finger BED domain-containing protein 1-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XDM4_SITOR)

HSP 1 Score: 68.9 bits (167), Expect = 2.140e-10
Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0
Query:   45 RKTITRYKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVIRTD-EVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVIPLTKDLRDHLASAREYCAPRLDV 173
            R  ++ +K S QAT +L    +  G   + +KQDV TRW+ST+  ++RLLE++  +      L     SL+  +W+I+      L+PI I+  V   E Y + S++IPL + L+  L    ++  P  DV
Sbjct:  405 RSLVSYFKHSVQATEKLKTTQIQMGFPVLKIKQDVSTRWNSTLFMLERLLEIKDALSVILSSLPKAPASLNATEWSIVWDCVPVLKPIEIITSVLSAEKYPTISIIIPLIRGLQHTL----QHINPTTDV 530          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199604.5612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE7.120e-3242.86Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI8.450e-2942.68Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE6.620e-2740.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001B88A2031.810e-1331.85zinc finger BED domain-containing protein 4-like n... [more]
A0A835GBL2_SPOEX9.280e-1334.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sp... [more]
A0A835G454_SPOEX2.320e-1232.88Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI001B88C6E05.920e-1229.93E3 SUMO-protein ligase ZBED1-like n=1 Tax=Gigantop... [more]
A0A8N7W5P2_SPOFR2.440e-1130.26zinc finger BED domain-containing protein 1-like n... [more]
UPI000B9391462.000e-1028.30zinc finger BED domain-containing protein 1-like n... [more]
A0A6J2XDM4_SITOR2.140e-1032.31zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 15..167
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 15..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199604contigH-elongata_contig199604:550..1086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199604.5612.1mRNA_H-elongata_contig199604.5612.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199604 550..1116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199604.5612.1 ID=prot_H-elongata_contig199604.5612.1|Name=mRNA_H-elongata_contig199604.5612.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
MVKAGRLLDDKKLTTHVGCAGHRLQSSAGVVFTGDGVTRALANARKTITR
YKASSQATARLHKRCVDAGIKPMTVKQDVPTRWSSTVDSVDRLLELRKVI
RTDEVLEGISPSLSDVDWAILEKVKIALEPIRILQRVFEGENYVSGSLVI
PLTKDLRDHLASAREYCAPRLDVCAEAQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf