prot_H-elongata_contig198770.5574.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198770.5574.1
Unique Nameprot_H-elongata_contig198770.5574.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 4.270e-15
Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 SWWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLVTV 63
            +WWD+H+A  PLL  REL+ R+ CV ASSA+SERLFSKAG TLTK+RS   G RVAQLVT+
Sbjct:  504 TWWDQHKATFPLL--RELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTL 562          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A6H5KHJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.100e-6
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    4 WWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLVTV 63
            WW++ Q        R+LA RV CV A SASS+RLF K G     KR++ +G RVAQ +TV
Sbjct:  409 WWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQRLTV 468          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A8J9UI59_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UI59_BRAAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.820e-6
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    4 WWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLV 61
            WW E ++  P L+  +LA +  CV A+S  SER+FSKAG T+T +R++  G +V QLV
Sbjct:  446 WWQERKSIYPRLY--QLAVKKLCVVATSVPSERIFSKAGQTVTDRRNRLSGEKVRQLV 501          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A1A8SIR0_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8SIR0_9TELE)

HSP 1 Score: 49.7 bits (117), Expect = 3.260e-6
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    4 WWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLV 61
            WW EH+   P L   +LA R   V ASS  +ER+FSKAG  L+K+RS+ KG  V  L+
Sbjct:   34 WWQEHEQTFPAL--SKLAVRYLGVVASSVPAERIFSKAGEVLSKRRSRLKGKTVNMLL 89          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: J9KYE6_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KYE6_ACYPI)

HSP 1 Score: 50.1 bits (118), Expect = 1.860e-5
Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    5 WDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLVTVG 64
            W++ ++  PL++    A +V CV A+S  SERLFSKAG TL+K+R++  G R+ +L+ +G
Sbjct:  493 WEDMKSVFPLMYME--AQKVLCVVATSVPSERLFSKAGATLSKERNRLLGKRLFKLLFLG 550          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: UPI0018914D3C (zinc finger BED domain-containing protein 4-like n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=UPI0018914D3C)

HSP 1 Score: 48.1 bits (113), Expect = 3.370e-5
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    4 WWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLV 61
            WW EH+   P L   +LA R   ++A+S  +ER+FSKAG  L+KKR++ KG  V  ++
Sbjct:   87 WWKEHEPTFPAL--SKLAVRYMGITATSVPAERVFSKAGEVLSKKRNRLKGKTVNMIL 142          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A8B8FAF4_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8FAF4_9HEMI)

HSP 1 Score: 49.3 bits (116), Expect = 3.460e-5
Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    5 WDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLVTVG 64
            W++ ++  PL++    A +V CV A+S  SERLFSKAG TL+K+R++  G R+ +L+ +G
Sbjct:  424 WEDMKSVYPLIYME--AQKVFCVVATSVPSERLFSKAGATLSKERNRLLGKRLFKLLFLG 481          
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Match: A0A8C6PX52_NOTFU (BED-type domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6PX52_NOTFU)

HSP 1 Score: 49.3 bits (116), Expect = 3.470e-5
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0
Query:    4 WWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRSKFKGPRVAQLVT 62
            WW EH    P L   +LA R   + ASS  +ER+FSKAG  L KKRS+ KG  +A+ +T
Sbjct:  476 WWQEHGQTFPAL--SKLAVRYLGIVASSVPAERIFSKAGEVLRKKRSRLKGKTLAKQLT 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198770.5574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KA14_9PHAE4.270e-1567.21Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KHJ9_9PHAE1.100e-648.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A8J9UI59_BRAAE2.820e-646.55Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A1A8SIR0_9TELE3.260e-648.28Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
J9KYE6_ACYPI1.860e-543.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac... [more]
UPI0018914D3C3.370e-543.10zinc finger BED domain-containing protein 4-like n... [more]
A0A8B8FAF4_9HEMI3.460e-543.33zinc finger BED domain-containing protein 1-like n... [more]
A0A8C6PX52_NOTFU3.470e-547.46BED-type domain-containing protein n=1 Tax=Nothobr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 2..61
e-value: 1.4E-8
score: 34.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198770contigH-elongata_contig198770:860..1051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198770.5574.1mRNA_H-elongata_contig198770.5574.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198770 860..1066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198770.5574.1 ID=prot_H-elongata_contig198770.5574.1|Name=mRNA_H-elongata_contig198770.5574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MGSWWDEHQAALPLLFFRELATRVRCVSASSASSERLFSKAGFTLTKKRS
KFKGPRVAQLVTVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf