prot_H-elongata_contig1987.5570.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1987.5570.1
Unique Nameprot_H-elongata_contig1987.5570.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.880e-85
Identity = 136/188 (72.34%), Postives = 151/188 (80.32%), Query Frame = 0
Query:   78 SARLPLLAAANISRRNMSTKKDKNVASTI--PGMIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKE 263
            SA + L A    SRR MS+ +    ++T   PG IKGFG RQK  + GNTALGKGFDLMEDD  SRKK+VI GYDPHGFQLGDGVDVRGSMIC PNSFVLW+PKR  DIT+ESL ++ELV PKID+ I+GVGERMT RLDP LVKHL+SK I VEQMDTVNACSTFNVLNAEDRRVA ALLQLS  +E
Sbjct:   20 SAHVQLTALLFCSRRGMSSARGGKGSNTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 207          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.740e-30
Identity = 56/127 (44.09%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  130 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            G D+ ++ +    K+ IA YD  GF + D V++RGS+   P+  ++W+P    +IT+ESL++  +  P I+I ++G G+R+  +LDPKLV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAIL 148          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A8K1C5C2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5C2_PYTOL)

HSP 1 Score: 118 bits (296), Expect = 1.650e-29
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 0
Query:  130 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            G D+ ++ +    KI +  YD  GF + D V++RG ++ FP   +LW+PKR  +IT ESL L     P ++I ++G G R++ +LDP+L + L    I VE  D+ NACSTFN+LNAEDR+VA A+L
Sbjct:   36 GHDMHKEMLNGTAKISVTEYDDGGFVVND-VNLRGGVVLFPEIAMLWKPKRFEEITKESLELFTFANPPVEILVLGCGARLSRQLDPELAEFLKVNGIVVEYSDSANACSTFNILNAEDRKVAAAIL 161          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC)

HSP 1 Score: 117 bits (294), Expect = 2.260e-29
Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 0
Query:  130 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            G D+ ++ +    K+ I+ YD  GF + D V++RGS+   PN  ++W+P+   +IT+ESL++  +  P I+I ++G G+R+ ++L+P LV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAIL 150          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.220e-29
Identity = 60/138 (43.48%), Postives = 90/138 (65.22%), Query Frame = 0
Query:  127 LGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKEE 264
            +G+G D+M        KI + G++  GF +G  ++++ S++  PNSF LW+P+   +IT+ESL L  L+TPKI++ IIG GER  E L P+L+++   K I VE M T +A +T+NVL +EDR VA ALL +  T +E
Sbjct:   43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTDKE 179          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC)

HSP 1 Score: 118 bits (296), Expect = 5.250e-29
Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 0
Query:  127 LGKGFDLM----EDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTER-LDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKEET 265
            LGKG D++    E++ G R++  + GYD  GF++ D V+ RGS++  P +  LW+PK+  +IT ESL  L +V P I+I IIG GE +  R L    +K L++  ++VE MDT +ACSTFN+LN EDRRVA ALL +    EE+
Sbjct:   68 LGKGIDVLAVGNEEEAG-RERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAEES 209          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.020e-28
Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 0
Query:  126 ALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            A+  G DL ++ +    K+ +  YD  GF + D V++RG +  +P   +LW+PKR  +IT ESL +  +  P I+I ++G G R+   LDP++ + L    I VE +D+VNAC+TFN+LNAEDR+VA A+L
Sbjct:   21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAIL 150          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A3R7H579_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H579_9STRA)

HSP 1 Score: 114 bits (284), Expect = 4.270e-28
Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 0
Query:  133 LMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            + ++ +    K+ I  YD  GF + + V++RG +  F    +LW+PKR  DIT E L +  +  P I+I I+G GER++  LDPKL + L    I VE +DTVNAC+TFN+LNAEDRRVA ALL
Sbjct:    1 MHKEMLNGTAKVSITEYDEGGFVINN-VNMRGGVALFSEIAMLWKPKRMEDITSEHLAVFTVANPPIEILILGCGERISHMLDPKLKEMLKVNGIVVEYLDTVNACATFNILNAEDRRVAAALL 123          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A6G0XVP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.830e-27
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 0
Query:  130 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            G D+ ++ +    K+ I  YD  GF + + V++RG++  FP   +LW+PK   +IT ESL +  +  P ++I ++G G+R+   LDP LV +L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   22 GHDMHQEMMMDSPKVAITEYDDGGFVVNE-VNMRGAIALFPEIAMLWKPKTMDEITKESLTVFTVANPPVEILVLGCGKRIPRLLDPSLVDYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147          
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.880e-27
Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 0
Query:  116 RQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 256
            RQ     G   +  G D+ ++ +    K+ I  YD  GF + + V++RG++  FP   +LW+P+   +IT ESL +  +  P ++I ++G G+R+   LDP LV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:    8 RQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV73_ECTSI1.880e-8572.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YKK9_9STRA2.740e-3044.09NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8K1C5C2_PYTOL1.650e-2944.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CV35_SAPPC2.260e-2942.52Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S1UI11_9STRA3.220e-2943.48Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
K8Z3H4_NANGC5.250e-2945.83Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidac... [more]
A0A5D6XPN1_9STRA4.020e-2841.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3R7H579_9STRA4.270e-2846.77Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6G0XVP0_9STRA1.830e-2742.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LLY5_9STRA1.880e-2739.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 146..256
e-value: 5.0E-31
score: 107.0
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 95..263
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 141..259
e-value: 1.7E-33
score: 116.9
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 144..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1987contigH-elongata_contig1987:4630..7760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1987.5570.1mRNA_H-elongata_contig1987.5570.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1987 2386..7816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1987.5570.1 ID=prot_H-elongata_contig1987.5570.1|Name=mRNA_H-elongata_contig1987.5570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MEALPRPLLLATRPCVRARRLWASGLGGGGVDPCRDISSSATTPFVEQTS
AAQGARTGTSPPLSPISVALSPYDRRCSARLPLLAAANISRRNMSTKKDK
NVASTIPGMIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYD
PHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKID
IAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRR
VAVALLQLSETKEET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007523NDUFAF3/AAMDC
IPR036748MTH938-like_sf