prot_H-elongata_contig198678.5569.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198678.5569.1
Unique Nameprot_H-elongata_contig198678.5569.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.460e-19
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    9 TQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFER 55
            T+VV NIL NPA+VKFRELR NNKTIQRAVL CHGGREFLSLLGFE+
Sbjct:   37 TKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEK 83          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A7S4M1Z1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M1Z1_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 9.530e-8
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    3 TCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            T L    +VV NIL +PA  K+R L+V NKTI+  VL C GGR  L  +GFE
Sbjct:   13 TALSTLLKVVGNILADPAEPKYRTLKVENKTIKEKVLSCPGGRALLLSVGFE 64          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A0M0JXN5_9EUKA (Thioredoxin domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXN5_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.660e-7
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   10 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFER 55
            +++RNIL +P   K+R L+ +NKT++  VL C GG EFL   GFER
Sbjct:  144 KILRNILKDPTEPKYRALKADNKTLKEKVLACRGGSEFLLAAGFER 189          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A1S2YDV4_CICAR (plant UBX domain-containing protein 2 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YDV4_CICAR)

HSP 1 Score: 51.2 bits (121), Expect = 5.160e-6
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   10 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            +++RNI+  P NVKFR++R+NN  I+ A+    GG E LS LGFE
Sbjct:  189 KLLRNIVREPENVKFRKIRMNNPKIKEAIADVIGGVELLSFLGFE 233          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A2Z6MQ22_TRISU (UBX domain-containing protein n=2 Tax=Trifolium TaxID=3898 RepID=A0A2Z6MQ22_TRISU)

HSP 1 Score: 51.2 bits (121), Expect = 5.160e-6
Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   10 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            +++RNI+  P NVKFR++R++N  I+ AV   +GG E LS LGFE
Sbjct:  187 KLLRNIVKEPENVKFRKIRLSNPKIKEAVAEVNGGIELLSFLGFE 231          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A6J2W7V0_CHACN (UBX domain-containing protein 6 isoform X1 n=2 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W7V0_CHACN)

HSP 1 Score: 50.8 bits (120), Expect = 7.050e-6
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   12 VRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            + NI  NPA  K+R+++V+NK  Q  V G  G REFL  LGFE
Sbjct:  178 IENICKNPAEEKYRKIKVSNKIFQEKVRGIEGSREFLQALGFE 220          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A5J4XGV6_9CHLO (UBX domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XGV6_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 1.810e-5
Identity = 20/46 (43.48%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 TQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            ++V+RNI+++PA  K+R+L++NNK +Q+ V+   G  E L   GFE
Sbjct:  130 SKVLRNIVEHPAEAKYRKLKLNNKKVQQCVVNVDGSLELLQASGFE 175          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: I1K5Q4_SOYBN (UBX domain-containing protein n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1K5Q4_SOYBN)

HSP 1 Score: 49.3 bits (116), Expect = 2.470e-5
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   10 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            +++RNI   PANVKFR +R+NN  I+ AV    GG E LS +GFE
Sbjct:  184 KLLRNIGREPANVKFRRIRMNNPKIKEAVGDVAGGVELLSFVGFE 228          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A7S3FHF4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FHF4_9EUKA)

HSP 1 Score: 47.8 bits (112), Expect = 2.980e-5
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    2 STCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            +  L +  +VV NIL NPA+ K+R L+V N  ++  V  C GGRE L   G+ 
Sbjct:   43 NVALHIMLKVVTNILSNPADPKYRTLKVENSALKAKVFACPGGRELLLAAGWR 95          
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: S8CCH2_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CCH2_9LAMI)

HSP 1 Score: 48.9 bits (115), Expect = 3.380e-5
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   10 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 54
            ++VRNIL +P+N KFR++R  N  I+ A++   GG EFL  +GF+
Sbjct:  159 KLVRNILKDPSNPKFRKVRTGNIKIKEAIIDVAGGVEFLEFIGFK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LFP8_ECTSI2.460e-1985.11Similar to peptide-N(4)-(N-acetyl-beta-glucosaminy... [more]
A0A7S4M1Z1_9EUKA9.530e-851.92Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A0M0JXN5_9EUKA1.660e-750.00Thioredoxin domain-containing protein n=1 Tax=Chry... [more]
A0A1S2YDV4_CICAR5.160e-651.11plant UBX domain-containing protein 2 n=1 Tax=Cice... [more]
A0A2Z6MQ22_TRISU5.160e-651.11UBX domain-containing protein n=2 Tax=Trifolium Ta... [more]
A0A6J2W7V0_CHACN7.050e-651.16UBX domain-containing protein 6 isoform X1 n=2 Tax... [more]
A0A5J4XGV6_9CHLO1.810e-543.48UBX domain-containing protein n=1 Tax=Trebouxia sp... [more]
I1K5Q4_SOYBN2.470e-553.33UBX domain-containing protein n=4 Tax=Glycine subg... [more]
A0A7S3FHF4_9EUKA2.980e-541.51Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
S8CCH2_9LAMI3.380e-546.67Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.2190coord: 1..55
e-value: 7.4E-15
score: 56.4
IPR018997PUB domainPFAMPF09409PUBcoord: 9..55
e-value: 5.6E-14
score: 51.8
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 11..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198678contigH-elongata_contig198678:72..239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198678.5569.1mRNA_H-elongata_contig198678.5569.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198678 72..239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198678.5569.1 ID=prot_H-elongata_contig198678.5569.1|Name=mRNA_H-elongata_contig198678.5569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
FSTCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSL
LGFER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf