mRNA_H-elongata_contig198678.5569.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 2.460e-19 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
Query: 25 TQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFER 165
T+VV NIL NPA+VKFRELR NNKTIQRAVL CHGGREFLSLLGFE+
Sbjct: 37 TKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEK 83
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A7S4M1Z1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M1Z1_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 9.530e-8 Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 7 TCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
T L +VV NIL +PA K+R L+V NKTI+ VL C GGR L +GFE
Sbjct: 13 TALSTLLKVVGNILADPAEPKYRTLKVENKTIKEKVLSCPGGRALLLSVGFE 64
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A0M0JXN5_9EUKA (Thioredoxin domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXN5_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 1.660e-7 Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 28 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFER 165
+++RNIL +P K+R L+ +NKT++ VL C GG EFL GFER
Sbjct: 144 KILRNILKDPTEPKYRALKADNKTLKEKVLACRGGSEFLLAAGFER 189
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A1S2YDV4_CICAR (plant UBX domain-containing protein 2 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YDV4_CICAR) HSP 1 Score: 51.2 bits (121), Expect = 5.160e-6 Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 28 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
+++RNI+ P NVKFR++R+NN I+ A+ GG E LS LGFE
Sbjct: 189 KLLRNIVREPENVKFRKIRMNNPKIKEAIADVIGGVELLSFLGFE 233
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A2Z6MQ22_TRISU (UBX domain-containing protein n=2 Tax=Trifolium TaxID=3898 RepID=A0A2Z6MQ22_TRISU) HSP 1 Score: 51.2 bits (121), Expect = 5.160e-6 Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 28 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
+++RNI+ P NVKFR++R++N I+ AV +GG E LS LGFE
Sbjct: 187 KLLRNIVKEPENVKFRKIRLSNPKIKEAVAEVNGGIELLSFLGFE 231
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A6J2W7V0_CHACN (UBX domain-containing protein 6 isoform X1 n=2 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W7V0_CHACN) HSP 1 Score: 50.8 bits (120), Expect = 7.050e-6 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 34 VRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
+ NI NPA K+R+++V+NK Q V G G REFL LGFE
Sbjct: 178 IENICKNPAEEKYRKIKVSNKIFQEKVRGIEGSREFLQALGFE 220
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A5J4XGV6_9CHLO (UBX domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XGV6_9CHLO) HSP 1 Score: 49.7 bits (117), Expect = 1.810e-5 Identity = 20/46 (43.48%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 25 TQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
++V+RNI+++PA K+R+L++NNK +Q+ V+ G E L GFE
Sbjct: 130 SKVLRNIVEHPAEAKYRKLKLNNKKVQQCVVNVDGSLELLQASGFE 175
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: I1K5Q4_SOYBN (UBX domain-containing protein n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1K5Q4_SOYBN) HSP 1 Score: 49.3 bits (116), Expect = 2.470e-5 Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 28 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
+++RNI PANVKFR +R+NN I+ AV GG E LS +GFE
Sbjct: 184 KLLRNIGREPANVKFRRIRMNNPKIKEAVGDVAGGVELLSFVGFE 228
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: A0A7S3FHF4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FHF4_9EUKA) HSP 1 Score: 47.8 bits (112), Expect = 2.980e-5 Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 4 STCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
+ L + +VV NIL NPA+ K+R L+V N ++ V C GGRE L G+
Sbjct: 43 NVALHIMLKVVTNILSNPADPKYRTLKVENSALKAKVFACPGGRELLLAAGWR 95
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Match: S8CCH2_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CCH2_9LAMI) HSP 1 Score: 48.9 bits (115), Expect = 3.380e-5 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 28 QVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLLGFE 162
++VRNIL +P+N KFR++R N I+ A++ GG EFL +GF+
Sbjct: 159 KLVRNILKDPSNPKFRKVRTGNIKIKEAIIDVAGGVEFLEFIGFK 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198678.5569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig198678.5569.1 >prot_H-elongata_contig198678.5569.1 ID=prot_H-elongata_contig198678.5569.1|Name=mRNA_H-elongata_contig198678.5569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp FSTCLCLPTQVVRNILDNPANVKFRELRVNNKTIQRAVLGCHGGREFLSLback to top mRNA from alignment at H-elongata_contig198678:72..239- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig198678.5569.1 ID=mRNA_H-elongata_contig198678.5569.1|Name=mRNA_H-elongata_contig198678.5569.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=168bp|location=Sequence derived from alignment at H-elongata_contig198678:72..239- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig198678:72..239- >mRNA_H-elongata_contig198678.5569.1 ID=mRNA_H-elongata_contig198678.5569.1|Name=mRNA_H-elongata_contig198678.5569.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=336bp|location=Sequence derived from alignment at H-elongata_contig198678:72..239- (Himanthalia elongata Himel1 dioecious)back to top |