prot_H-elongata_contig19853.5565.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19853.5565.1
Unique Nameprot_H-elongata_contig19853.5565.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length461
Homology
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BLAST of mRNA_H-elongata_contig19853.5565.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.180e-12
Identity = 61/134 (45.52%), Postives = 70/134 (52.24%), Query Frame = 0 
Query:  344 VLAGDAALAYDRDVLGGDGLAE------------------YAVG----CQVSDPGGTAVSPPQGPTRSRARRLSGSTGLSNGLRSSRGG------ENPISEVRQSGQDEVGAGVEAVAVTVTPGELKKARVIGQ 449
            + A  AALAYD+DVLGGDGL                     A G    C VSD GG AV  PQGP   RAR+  G    +   + SR        E  I +V Q+GQDEVGAG  AVAVTVTP EL +A +IGQ
Sbjct: 1275 MRAAGAALAYDQDVLGGDGLGGDGEEEEEPDTVDGVLGKFLATGDYDSCHVSDAGGAAVYSPQGPGGDRARKAGGEAEKAAPEKDSRYNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELSEALLIGQ 1408
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BLAST of mRNA_H-elongata_contig19853.5565.1 vs. uniprot
Match: A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 8.560e-12
Identity = 62/132 (46.97%), Postives = 69/132 (52.27%), Query Frame = 0 
Query:  349 AALAYDRDVLGGDGLAEY------------------AVG----CQVSDPGGTAVSPPQGPTRSRARRLSGSTGLS--------NGLRSSRGGENPISEVRQSGQDEVGAGVEAVAVTVTPGELKKARVIGQV 450
            AALAYD+DVLGGDGL                     A G    C VSD GG AV  PQGP   RAR+  G    +        N L   R  E  I +V Q+GQDEVGAG  AVAVTVTP EL +A +IGQV
Sbjct: 1200 AALAYDQDVLGGDGLGXXXXXXEKPDTVDGVLGKFLATGGYDSCHVSDAGGRAVYSPQGPGGGRARKAGGEAEKAAAETDSQHNPLPGRR--ERQIPQVLQAGQDEVGAGAGAVAVTVTPEELGEALLIGQV 1329
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19853.5565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9D8_ECTSI2.180e-1245.52MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JWV7_9PHAE8.560e-1246.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19853contigH-elongata_contig19853:3653..5480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19853.5565.1mRNA_H-elongata_contig19853.5565.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19853 3431..5504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19853.5565.1 ID=prot_H-elongata_contig19853.5565.1|Name=mRNA_H-elongata_contig19853.5565.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
MGEGVTLESSQPPCPERSFPSPSSTSQQVGQRENKNNIVNESRGLGASGA
ELLAFPGMSSNGTDAPFDASRRTQMTAEGSDSRKRRNGGHSTLPVGAGSA
FTPPRRTKRRRSDWLLETNMGERAPNGAACSRWDPSPLTSPQQRKRLPVE
IPSIYTTDADRRSTPARDGPSPGGGEDEICVADDWWGLDASNLPRGSKTA
VWPSGGSAVGSQKNATMENVTGENRLDALEESRGLESDDATVRDCHPDGD
DDTMGEFITEKATCRPERVCHTELECDELPEGSEGSGQQYPTKRRGGLGT
MNTGNDAQGIEASQRNDSPDTKSDSSTANNDTEGRELPRNTAPVLAGDAA
LAYDRDVLGGDGLAEYAVGCQVSDPGGTAVSPPQGPTRSRARRLSGSTGL
SNGLRSSRGGENPISEVRQSGQDEVGAGVEAVAVTVTPGELKKARVIGQV
WKGESVFRPV*
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