prot_H-elongata_contig19851.5564.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19851.5564.1
Unique Nameprot_H-elongata_contig19851.5564.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
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BLAST of mRNA_H-elongata_contig19851.5564.1 vs. uniprot
Match: A0A6H5LG44_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG44_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.070e-18
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0 
Query:   18 GTDVVHRDSSFVSTDLGDGIVGVRTRSEQRGAMAGIYKVYLSWGTAFLRSELIRKVPDETRLVYPNKETT 87
            G   V RDSSFV+TD GDG++ +RTR E++GA  GI KV LSW  AFLR E IR VP ++R+++PNK+TT
Sbjct:  354 GAGGVRRDSSFVATDFGDGLIELRTRKERQGAPPGIQKVRLSWAVAFLREECIRSVPHKSRVIFPNKDTT 423
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BLAST of mRNA_H-elongata_contig19851.5564.1 vs. uniprot
Match: D7FMT0_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT0_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.400e-17
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:   22 VHRDSSFVSTDLGDGIVGVRTRSEQRGAMAGIYKVYLSWGTAFLRSELIRKVPDETRLVYPNKETT 87
            V RDSSFV TD GDG++ +RTR E++GA  G+ KV LSW  A+LR E IR VP +TR+++PNK+TT
Sbjct:  378 VRRDSSFVDTDFGDGLIELRTRKERQGAPPGMQKVRLSWAVAYLREECIRSVPHKTRVIFPNKDTT 443
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19851.5564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LG44_9PHAE4.070e-1858.57ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
D7FMT0_ECTSI1.400e-1759.09ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19851contigH-elongata_contig19851:4698..5760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19851.5564.1mRNA_H-elongata_contig19851.5564.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19851 2954..5860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19851.5564.1 ID=prot_H-elongata_contig19851.5564.1|Name=mRNA_H-elongata_contig19851.5564.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
MLAPADIVDDDVDVVGVGTDVVHRDSSFVSTDLGDGIVGVRTRSEQRGAM
AGIYKVYLSWGTAFLRSELIRKVPDETRLVYPNKETTVRLLVFMLKVDGE
LASLPKETCQNPTTSPVSLIPSFGDNVDRPI*
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