prot_H-elongata_contig19849.5563.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19849.5563.1
Unique Nameprot_H-elongata_contig19849.5563.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length348
Homology
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BLAST of mRNA_H-elongata_contig19849.5563.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 3.140e-46
Identity = 170/392 (43.37%), Postives = 201/392 (51.28%), Query Frame = 0 
Query:    1 MIRRPPLRPGVS-KKGCTSSFKVTYSVNQLLAKGKASVSEESGCPPPEGWEKYQYDKIGPLHQEDGNPRQTPAATKEYLATLVMKPGSARDLHAEXXXXXXXXXXXXXXXXSSLGTRGGGTR----------------VAGLGRGEXXXXXXRFGDRNKDRDWGLARFDHXXXXR-----------GDGGRRERPRDGQQPSNRPPSRWDALKPDRDRDRGYNNRSNRDSRDRDDGDELGGGSRQDARLGGGRERDGRNARGG-----------DSVRDGGLAAHDRALASERA---GGXXXXXXXXXXXXXXXXXXSRD--RYGGGGMTNEADIWDMPASALPGTEGASKDPPRNSRAAGLRSAEREQREKDRKAEEVREFQATKLLFEKE 348
            M+RRPP R G+  KK   + FK+TYSVNQLL+ GK  +  E+GCPPPEGW+KY+YD IGPL  E+     T   +KE  A L MKPGSARDLH+E                 SLG RGGG R                      G+      RFGDRNK           XXXX            G GG             R PSRWDALKPDR+RDRGYN                                                   D + DGGL AHDRA+A E+A   GG XXXXXXXXXXXXXXXXX     RYGG   T+EADIWDMP + LPG  GA+K+PP+N+RAAGLRSA+RE+RE++RK +E   F+  +L FE+E
Sbjct:    1 MMRRPPTRAGLGGKKASGTGFKITYSVNQLLSMGKELMESEAGCPPPEGWDKYEYDTIGPLIDENN----TRIPSKEEAAALKMKPGSARDLHSEHIAALVAKQGADPDQSPSLGPRGGGDRPDRDRGXXXXXXXXXXXXXXXWGDRDRDWDRFGDRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGGAG---------GGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGG---TSEADIWDMPTT-LPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERE 375
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19849.5563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y0_ECTSI3.140e-4643.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 321..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19849contigH-elongata_contig19849:1273..6982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19849.5563.1mRNA_H-elongata_contig19849.5563.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19849 1273..6982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19849.5563.1 ID=prot_H-elongata_contig19849.5563.1|Name=mRNA_H-elongata_contig19849.5563.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp
MIRRPPLRPGVSKKGCTSSFKVTYSVNQLLAKGKASVSEESGCPPPEGWE
KYQYDKIGPLHQEDGNPRQTPAATKEYLATLVMKPGSARDLHAEHLAALA
AKQAQAPDLHSSLGTRGGGTRVAGLGRGERDRDRDRFGDRNKDRDWGLAR
FDHDRDRRGDGGRRERPRDGQQPSNRPPSRWDALKPDRDRDRGYNNRSNR
DSRDRDDGDELGGGSRQDARLGGGRERDGRNARGGDSVRDGGLAAHDRAL
ASERAGGGGSGGRERDRDRGAGGGGSRDRYGGGGMTNEADIWDMPASALP
GTEGASKDPPRNSRAAGLRSAEREQREKDRKAEEVREFQATKLLFEKE
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