prot_H-elongata_contig198275.5550.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198275.5550.1
Unique Nameprot_H-elongata_contig198275.5550.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A7S6UA28_9STRA (30S ribosomal protein S16, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA28_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.750e-49
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADIQIDN 80
            MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADIQIDN
Sbjct:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADIQIDN 80          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A8F0F7A6_9PHAE (Ribosomal protein S16 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 9.350e-31
Identity = 49/76 (64.47%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76
            MLK+R KRCGRKK+PFYRIV+M+NKTKRDG  +E+LG+YNP+ KTF +NR+RT+ RL+ G  PT+V+KNL +K++I
Sbjct:    1 MLKIRFKRCGRKKQPFYRIVLMDNKTKRDGNVVEELGFYNPLNKTFQINRVRTIIRLDNGAQPTEVLKNLFRKSNI 76          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A141BSI6_9PHAE (30S ribosomal protein S16, chloroplastic n=16 Tax=Fucales TaxID=3009 RepID=A0A141BSI6_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 6.320e-29
Identity = 51/76 (67.11%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76
            MLK+R KR GRKK+PFY+IVVM+ +TKRDGKA+E+LG+YNPITKT ++N  RT+ RL+ GV PT+VVKNLL+K+ I
Sbjct:    1 MLKIRFKRTGRKKQPFYKIVVMDVRTKRDGKALEELGFYNPITKTLNINCERTISRLKNGVQPTEVVKNLLRKSSI 76          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: D1J702_ECTSI (30S ribosomal protein S16, chloroplastic n=32 Tax=Phaeophyceae TaxID=2870 RepID=D1J702_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 7.380e-28
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKA 74
            MLK+R KR GRKK+PFYRIVVM+ KTKRDGK +E+LG+Y+PI KTF +NR RT++RL  GV PT+VVKNLL+++
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRS 74          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A1I9LW03_9PHAE (30S ribosomal protein S16, chloroplastic n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A1I9LW03_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.490e-27
Identity = 51/74 (68.92%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKA 74
            MLK+R KR GRKK+PFYRIVVM+ KTKRDGKA+E+LG+Y+P+ KTF +NR RT+ RL  GV PT+VVKNLL +A
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKALEELGFYDPMNKTFQINRERTIIRLANGVQPTEVVKNLLIRA 74          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A2I4Q2M7_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M7_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.110e-27
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76
            MLK+R KR GRKK PFYRIVV+NN+TKRDGK IE+LG YNP+TK   +N +RT+ RLE G  PT+VVKNL +K+ +
Sbjct:    1 MLKIRFKRGGRKKHPFYRIVVINNRTKRDGKVIEELGSYNPLTKIIKINLVRTIIRLEDGAQPTEVVKNLFRKSSL 76          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A8F0FAS3_9PHAE (Ribosomal protein S16 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAS3_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.110e-27
Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKA 74
            MLK+R K CGRKK+PFYRIVVM+ +TKRDGK +E+LG+YNP+ KT  +NR RT+ RL  G  PT+VVKNLL+K 
Sbjct:    1 MLKIRFKLCGRKKQPFYRIVVMDVRTKRDGKVLEELGFYNPMNKTLHINRERTISRLNHGAQPTEVVKNLLRKT 74          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: B7T1T4_VAULI (30S ribosomal protein S16, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1T4_VAULI)

HSP 1 Score: 103 bits (256), Expect = 3.550e-27
Identity = 49/76 (64.47%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76
            MLKLRLKRCGRKK+PFY+IVVMN  ++RDG AIE+LG+YNP+ KTF +N+ RT+ RL+QGV PT  + +LL+K +I
Sbjct:    1 MLKLRLKRCGRKKQPFYKIVVMNANSRRDGFAIEELGFYNPLNKTFKINKGRTIYRLKQGVQPTATLIDLLKKVNI 76          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A1X9PU17_9RHOD (30S ribosomal protein S16, chloroplastic n=1 Tax=Corynoplastis japonica TaxID=700918 RepID=A0A1X9PU17_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 1.290e-26
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76
            M+K+RLKRCGRKK P YRIV+MN+ +KRDG+A+E+LG+YNPIT   SLN  +  +RL+QG  PT  VKN+LQKA I
Sbjct:    1 MIKIRLKRCGRKKYPVYRIVLMNSMSKRDGRALEELGFYNPITNAISLNLSQLEKRLQQGAQPTNTVKNMLQKAQI 76          
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Match: A0A8E5XRF9_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF9_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 5.260e-26
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKA 74
            MLK+RLKR GRKK+PFYRIV+M+  TKRDGKAIE+LG+YNP+ K F +NR R + R++ G  PTQ+V NLL+K+
Sbjct:    1 MLKIRLKRFGRKKKPFYRIVLMDASTKRDGKAIEELGFYNPLNKIFYINRERIIMRIKTGAQPTQIVSNLLKKS 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198275.5550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6UA28_9STRA1.750e-49100.0030S ribosomal protein S16, chloroplastic n=1 Tax=S... [more]
A0A8F0F7A6_9PHAE9.350e-3164.47Ribosomal protein S16 n=1 Tax=Protohalopteris sp. ... [more]
A0A141BSI6_9PHAE6.320e-2967.1130S ribosomal protein S16, chloroplastic n=16 Tax=... [more]
D1J702_ECTSI7.380e-2867.5730S ribosomal protein S16, chloroplastic n=32 Tax=... [more]
A0A1I9LW03_9PHAE1.490e-2768.9230S ribosomal protein S16, chloroplastic n=2 Tax=C... [more]
A0A2I4Q2M7_9PHAE2.110e-2764.4730S ribosomal protein S16, chloroplastic n=1 Tax=D... [more]
A0A8F0FAS3_9PHAE2.110e-2764.86Ribosomal protein S16 n=1 Tax=Desmarestia aculeata... [more]
B7T1T4_VAULI3.550e-2764.4730S ribosomal protein S16, chloroplastic n=1 Tax=V... [more]
A0A1X9PU17_9RHOD1.290e-2663.1630S ribosomal protein S16, chloroplastic n=1 Tax=C... [more]
A0A8E5XRF9_9PHAE5.260e-2663.5130S ribosomal protein S16, chloroplastic n=1 Tax=I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 2..76
e-value: 1.4E-30
score: 103.1
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 8..64
e-value: 1.6E-18
score: 66.5
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 2..76
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 1..74
score: 22.891
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..80
e-value: 6.2E-27
score: 95.7
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 1..76
NoneNo IPR availablePANTHERPTHR12919:SF31coord: 2..76
IPR020592Ribosomal protein S16, conserved sitePROSITEPS00732RIBOSOMAL_S16coord: 2..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198275contigH-elongata_contig198275:553..795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198275.5550.1mRNA_H-elongata_contig198275.5550.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198275 553..795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198275.5550.1 ID=prot_H-elongata_contig198275.5550.1|Name=mRNA_H-elongata_contig198275.5550.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNR
LRTLERLEQGVIPTQVVKNLLQKADIQIDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf
IPR020592Ribosomal_S16_CS