prot_H-elongata_contig19781.5532.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19781.5532.1
Unique Nameprot_H-elongata_contig19781.5532.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length302
Homology
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A6H5JV08_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV08_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 3.210e-36
Identity = 83/182 (45.60%), Postives = 103/182 (56.59%), Query Frame = 0
Query:   68 LPVTAIESEEELATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKLRRR-------------------GRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGAAEALIEAFRSNVDVSRLLRDI 230
            LP T +E E++L  +    GS RLVLVDF A WCK+CKAI P V +LP   +G VAVAT DVD+AAE+A+ER VT +PHF++ +NGVQ+D YTGSSET+LL KL +                    G  +                            L AAEALI+AF  NVDV+RLLRDI
Sbjct:  488 LPATEVEDEQDLQAYLATTGSERLVLVDFGAEWCKNCKAILPLVRSLPERFDGAVAVATADVDKAAELADERKVTTIPHFVLLKNGVQVDTYTGSSETDLLSKLAQHLPDVGTPATEPSPAGSGPAGTGSSGAMIRSGPGEHVKGVNGEDIPGEKSAALKAAEALIDAFDGNVDVARLLRDI 669          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: D7FR90_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR90_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.480e-35
Identity = 114/269 (42.38%), Postives = 136/269 (50.56%), Query Frame = 0
Query:    1 MPYGFVPEIASLSPKRPAAAXXXXXTETTHVLTPASSGTAVSSAGAEA-------------PREG-----SSESTRK--DAVGSSRLLPVTAIESEEELATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKLRRR---------------GRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXR----LGAAEALIEAFRSNVDVSRLLRDI 230
            +PYGFVPEIASL      AA          V    ++ TAV  A                 P  G     S   TRK  +A      LP T +E E++L  F   AGS RLVLVDF A WCK+CKAI P V  LP   +G VAVAT DVD+AAE+A+ER VT +PHF++ +NGVQ+D YTGSSET+LL KL +                  SAXXX                        +    L AAEALI+AF  NVDV+RLLRDI
Sbjct:  397 LPYGFVPEIASLK----HAAETGSVAAKPGVSQAEANSTAVPPAXXXXXXXXXXXXXXXXXPGSGMVTGLSDSPTRKGPEAALVKEKLPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRNLPERFDGTVAVATADVDKAAELADEREVTTIPHFLLLKNGVQVDTYTGSSETDLLSKLAQHLPNVGSPSTEPSPAGSGSAXXXSSGAMIRSGPGEHAKGVNGEDVPGKNFAALKAAEALIDAFDGNVDVARLLRDI 661          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A8B8CGT0_CRAVI (Thioredoxin n=2 Tax=Crassostrea TaxID=6564 RepID=A0A8B8CGT0_CRAVI)

HSP 1 Score: 82.8 bits (203), Expect = 3.010e-16
Identity = 43/101 (42.57%), Postives = 65/101 (64.36%), Query Frame = 0
Query:   73 IESEEELATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSN--GGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKL 171
            I ++EEL    K+AG  +L+++DFWA WC  CK I P    L   S     V  A+VDVDEA E+AEE G+  +P  M F++G +ID+ +G+++ +L+EK+
Sbjct:    4 IFTQEELDDLLKSAGH-KLIIIDFWATWCGPCKVIGPMFRKLAHDSEYEKDVIFASVDVDEANELAEEIGIECMPTIMFFKDGEKIDEMSGANKAKLVEKI 103          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A1F7ZSQ3_9EURO (Thioredoxin n=1 Tax=Aspergillus bombycis TaxID=109264 RepID=A0A1F7ZSQ3_9EURO)

HSP 1 Score: 80.9 bits (198), Expect = 1.450e-15
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 0
Query:   68 LPVTAIESEEELATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSN-GGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKLRR 173
            + VTA+ S  E  T      S ++V++DFWA WC  C+AI+P    L +      +    VD DE  ++AEE G+ +LP FM+F+NG+++D+  G+S   L + +RR
Sbjct:    1 MSVTALNSLTEFQTLIN---SDQVVIIDFWATWCGPCRAISPVFEQLASIPEFSSIKFVKVDTDEQQDIAEEVGIRSLPTFMVFQNGIKVDELVGASPPGLEQLVRR 104          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A7X7P5R6_9BACT (Thioredoxin n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X7P5R6_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 1.420e-14
Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   82 FFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKL 171
            F  A  S +LVLVDFWA WC+ C+ + P +  L     G V +A ++ DE  E+    G+TN+P+F +F+NGV++    G+   + ++ L
Sbjct:   11 FDSAISSGQLVLVDFWATWCRPCQMMGPIMDQLAEDYQGRVLIAKINADECKEICTRFGITNIPNFKLFKNGVEVGNVVGAVPKDTIKNL 100          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A843C2J9_9ARCH (Thioredoxin n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A843C2J9_9ARCH)

HSP 1 Score: 76.6 bits (187), Expect = 5.580e-14
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   80 ATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKLRRR 174
            A F +   +++LVLVDFWAGWC  C+A+ P +  L    +G V V  +DVD   + AE   V ++P  ++F+NGV+I++  G S  + LE L ++
Sbjct:   11 ANFDETVKNNKLVLVDFWAGWCGPCRALAPTIEELSKDYSGKVLVGKLDVDSNPKTAECFQVFSIPTIILFKNGVEIERMVGLSAKKSLEDLLQK 105          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: UPI0005C858E6 (thioredoxin n=2 Tax=Paenibacillus TaxID=44249 RepID=UPI0005C858E6)

HSP 1 Score: 76.3 bits (186), Expect = 7.550e-14
Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   83 FKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLE 169
            F+++  S + LVDFWA WC  CK   P VH L +   G   +ATV+VDE AE+A + GV ++P  ++F++G  +DQ  G ++  +L+
Sbjct:   11 FQSSIQSGVSLVDFWAPWCGPCKVQLPIVHELASELEGQATIATVNVDENAELASQFGVRSIPTLLLFKDGRLVDQLIGINQKPILK 97          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A672YL00_9TELE (Thioredoxin-like n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672YL00_9TELE)

HSP 1 Score: 75.5 bits (184), Expect = 1.450e-13
Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   68 LPVTAIESEEELATFFKAAGSSRLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKL 171
            +PVT IE  ++     + AG  +LV+VDF A WC  CK I PF   L ++++  V    VDVDEAA+V++E G++ +P F  ++ G ++ +++G++   L +KL
Sbjct:    1 MPVTYIECLDDFKGALQGAGD-KLVVVDFTATWCGPCKTIAPFFEEL-SNTHANVVFLKVDVDEAADVSQECGISCMPTFHFYKKGEKVFEFSGANRETLKQKL 102          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: C3KHR9_ANOFI (Thioredoxin n=1 Tax=Anoplopoma fimbria TaxID=229290 RepID=C3KHR9_ANOFI)

HSP 1 Score: 75.1 bits (183), Expect = 2.130e-13
Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = 0
Query:   73 IESEEELATFFK--AAGSSRLVLVDFWAGWCKSCKAITP-FVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLEKL 171
            I+  + LA F K  A    +LV+VDF A WC  CK I+P F        N  V    VDVDEA EV+++ G++ +P F  ++NG+++D+++G+++  LLEKL
Sbjct:    2 IDDVKTLAEFKKILADAGDKLVVVDFTATWCGPCKMISPVFQQEDGKPENKNVIFVKVDVDEADEVSKDCGISCMPTFHFYKNGIKVDEFSGANKDTLLEKL 103          
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Match: A0A1W2WN02_CIOIN (Thioredoxin n=1 Tax=Ciona intestinalis TaxID=7719 RepID=A0A1W2WN02_CIOIN)

HSP 1 Score: 73.6 bits (179), Expect = 7.670e-13
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   72 AIESEEELATFFKAAGSS--RLVLVDFWAGWCKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMFENGVQIDQYTGSSETELLE 169
            AI    +LA F KA   +  +LVLVDF A WC  CK I P V  L  +    + V  VDVDEAA+VAE+  ++ +P F+ ++NG Q+  + G+++ +L E
Sbjct:    2 AIPDIRDLAEFNKALADAGNKLVLVDFHALWCGPCKMIAPTVKELANTHADKLVVLKVDVDEAADVAEQAEISAMPTFIFYKNGKQVATFKGANKEKLTE 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19781.5532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV08_9PHAE3.210e-3645.60Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D7FR90_ECTSI1.480e-3542.38Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A8B8CGT0_CRAVI3.010e-1642.57Thioredoxin n=2 Tax=Crassostrea TaxID=6564 RepID=A... [more]
A0A1F7ZSQ3_9EURO1.450e-1537.38Thioredoxin n=1 Tax=Aspergillus bombycis TaxID=109... [more]
A0A7X7P5R6_9BACT1.420e-1436.67Thioredoxin n=1 Tax=Fibrobacter sp. TaxID=35828 Re... [more]
A0A843C2J9_9ARCH5.580e-1438.95Thioredoxin n=1 Tax=Candidatus Bathyarchaeota arch... [more]
UPI0005C858E67.550e-1440.23thioredoxin n=2 Tax=Paenibacillus TaxID=44249 RepI... [more]
A0A672YL00_9TELE1.450e-1337.50Thioredoxin-like n=1 Tax=Sphaeramia orbicularis Ta... [more]
C3KHR9_ANOFI2.130e-1340.20Thioredoxin n=1 Tax=Anoplopoma fimbria TaxID=22929... [more]
A0A1W2WN02_CIOIN7.670e-1341.00Thioredoxin n=1 Tax=Ciona intestinalis TaxID=7719 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 51..174
e-value: 7.0E-24
score: 85.9
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 70..195
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 85..170
e-value: 2.2E-20
score: 72.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 35..180
score: 11.165
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 70..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19781contigH-elongata_contig19781:4761..6831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19781.5532.1mRNA_H-elongata_contig19781.5532.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19781 4492..6984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19781.5532.1 ID=prot_H-elongata_contig19781.5532.1|Name=mRNA_H-elongata_contig19781.5532.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp
MPYGFVPEIASLSPKRPAAAAAAAATETTHVLTPASSGTAVSSAGAEAPR
EGSSESTRKDAVGSSRLLPVTAIESEEELATFFKAAGSSRLVLVDFWAGW
CKSCKAITPFVHALPASSNGGVAVATVDVDEAAEVAEERGVTNLPHFMMF
ENGVQIDQYTGSSETELLEKLRRRGRSAGATAGVVGETTGDDSGSAGDGG
GDDGGRLGAAEALIEAFRSNVDVSRLLRDIHVNPRLIPASSPSMVAATAV
GVDGARAAAEGRKAKSASAGHGDGVHNRSRVAFKSREDIEAEAAGEGAPG
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf