prot_H-elongata_contig197690.5522.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197690.5522.1
Unique Nameprot_H-elongata_contig197690.5522.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
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BLAST of mRNA_H-elongata_contig197690.5522.1 vs. uniprot
Match: D8LNS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS0_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 6.570e-43
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 0 
Query:   10 VDTLCSALDRNKEGLVMTALKERGLEETTVLGQWWCKGLFVGGKACMYQNENDLAVACLKKGSKLAKSAALTRLRNEINQELEKAAKRLANQTKKAQKMWTK 111
            VDTLCSAL+RN++G VM  LKERG+ ETT+LGQWWCKGLF+GGKAC+YQ+EN+ AV  LKKGS+LAK AAL +LR EIN ELEKA KRLA+QTKKAQKMW+K
Sbjct:  264 VDTLCSALERNRDGKVMKELKERGVGETTILGQWWCKGLFLGGKACLYQSENEEAVNYLKKGSRLAKPAALAKLRAEINNELEKATKRLASQTKKAQKMWSK 365
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197690.5522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNS0_ECTSI6.570e-4375.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197690contigH-elongata_contig197690:126..999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197690.5522.1mRNA_H-elongata_contig197690.5522.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197690 126..999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197690.5522.1 ID=prot_H-elongata_contig197690.5522.1|Name=mRNA_H-elongata_contig197690.5522.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
MVTCFRDGQVDTLCSALDRNKEGLVMTALKERGLEETTVLGQWWCKGLFV
GGKACMYQNENDLAVACLKKGSKLAKSAALTRLRNEINQELEKAAKRLAN
QTKKAQKMWTK
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