prot_H-elongata_contig19748.5511.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19748.5511.1
Unique Nameprot_H-elongata_contig19748.5511.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length191
Homology
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BLAST of mRNA_H-elongata_contig19748.5511.1 vs. uniprot
Match: D8LGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY2_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.850e-22
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 0 
Query:   26 YVGVPIDDDVP-----PGVGHGASWAEGARFGDLYSDVARGAVSDLAGANKAAKMSARRDN----DQLRFTTAQARARAEEDERALEVARLNAKRRDAEGIDMRPHPGNRFKPE 130
            YVGVPIDDD       P     +     A  G ++ DV+ G  +D  GA +AAK SARRDN    ++ RFT AQA++R EED RA+E AR+NAKRRDAEG+DMRPHPGNR +PE
Sbjct:   62 YVGVPIDDDNHNELRRPSTAAASYDNSRAGAGRVHGDVSVGVGADYDGAAEAAKASARRDNAAFFEKKRFTEAQAKSRVEEDLRAIETARINAKRRDAEGLDMRPHPGNRLEPE 175
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19748.5511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY2_ECTSI2.850e-2254.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19748contigH-elongata_contig19748:1145..2121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19748.5511.1mRNA_H-elongata_contig19748.5511.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19748 1145..2123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19748.5511.1 ID=prot_H-elongata_contig19748.5511.1|Name=mRNA_H-elongata_contig19748.5511.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
KEAEKPLRLPTGMVMGVPSLGGQCVYVGVPIDDDVPPGVGHGASWAEGAR
FGDLYSDVARGAVSDLAGANKAAKMSARRDNDQLRFTTAQARARAEEDER
ALEVARLNAKRRDAEGIDMRPHPGNRFKPEPGYDKADQRGEKASTFGGAS
GKARDSSKDKYEEDGLKKTQASKDRDEEKTYSLGGYKVAEY
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