prot_H-elongata_contig19746.5510.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig19746.5510.1
Unique Name	prot_H-elongata_contig19746.5510.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	316

Homology

[Close]

BLAST of mRNA_H-elongata_contig19746.5510.1 vs. uniprot
Match: D7FX73_ECTSI (DRY_EERY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX73_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 6.260e-31
Identity = 137/231 (59.31%), Postives = 157/231 (67.97%), Query Frame = 0

Query:    1 MARVQQGEPDGAELLAARQAQNERYKKAETKAAMKEAKNAGVYGHYGPSGSGDGK--------VPSRGRGAEVALQYGGEVVGKPKGDRAGMSAPPEQPDEDEDG-----------AQLAPEIRALMGEE-GXXXXXXXXXXXXXXXXXFSEDXXXXXXXXXXXXXXXXXEEG-------ATLATQDHLGEEYGISEKRSGYSYSRLLRYERRHRAQQRAIRAEELESAKK 204
            +AR ++GEPD AEL AA++AQ++R KKAETKAA+KEAKNAGV+GHYGP   G           +PSRGRGAEVAL+YGG+VVG   G  AG                         AQL PEI AL+ +E GXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXX +        A  A+QD   E+YGISEKRSGYSYSRLLRYERRHRAQ RA R  E+++AKK
Sbjct:  146 IARFKKGEPDAAELAAAKEAQDKRNKKAETKAAIKEAKNAGVHGHYGPGAGGXXXXXXXGGVPLPSRGRGAEVALKYGGDVVG---GKSAGXXXXXXXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADAAQALSASQDLFAEDYGISEKRSGYSYSRLLRYERRHRAQHRANRMAEVDAAKK 373

[Close]

BLAST of mRNA_H-elongata_contig19746.5510.1 vs. uniprot
Match: A0A6H5KYK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK4_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 8.010e-12
Identity = 96/161 (59.63%), Postives = 105/161 (65.22%), Query Frame = 0

Query:   56 VPSRGRGAEVALQYGGEVVGKPKGDRAGMSAPPEQPDEDEDGAQLAPEIRALMGEEGXXXXXXXXXXXXXXXXXFSEDXXXXXXXXXXXXXXXXXEEG------------ATLATQDHLGEEYGISEKRSGYSYSRLLRYERRHRAQQRAIRAEELESAKK 204
            +PSRGRGAEVAL+YGG+VVG                      AQL PEI AL+ +E XXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXX               A  A QD   E+YGISEKRSGYSYSRLLRYERRHRA  RA R  E+++AKK
Sbjct:    8 LPSRGRGAEVALKYGGDVVGGKSXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADDLAAQALSAAQDLFAEDYGISEKRSGYSYSRLLRYERRHRALHRANRMAEVDAAKK 168

[Close]

BLAST of mRNA_H-elongata_contig19746.5510.1 vs. uniprot
Match: A0A6H5L0Z8_9PHAE (DRY_EERY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.570e-11
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 0

Query:    1 MARVQQGEPDGAELLAARQAQNERYKKAETKAAMKEAKNAGVYGHYGPSGSG 52
            +AR ++GEPD AEL AA++AQ++R KKAETKAA+KEAKNAGV+GHYGP G G
Sbjct:  146 IARFKKGEPDAAELAAAKEAQDKRNKKAETKAAIKEAKNAGVHGHYGPGGGG 197

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig19746.5510.1 vs. uniprot

BLAST of mRNA_H-elongata_contig19746.5510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FX73_ECTSI	6.260e-31	59.31	DRY_EERY domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KYK4_9PHAE	8.010e-12	59.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L0Z8_9PHAE	2.570e-11	71.15	DRY_EERY domain-containing protein (Fragment) n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38
None	No IPR available	COILS	Coil	Coil	coord: 180..200
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 274..295
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..273
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 296..315

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig19746	contig	H-elongata_contig19746:2586..6016 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig19746.5510.1	mRNA_H-elongata_contig19746.5510.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig19746 2325..6166 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig19746.5510.1 ID=prot_H-elongata_contig19746.5510.1|Name=mRNA_H-elongata_contig19746.5510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp
MARVQQGEPDGAELLAARQAQNERYKKAETKAAMKEAKNAGVYGHYGPSG
SGDGKVPSRGRGAEVALQYGGEVVGKPKGDRAGMSAPPEQPDEDEDGAQL
APEIRALMGEEGGGGGRGGTDGDSSDGSDFSEDDGGGEEDDDEEEGNNGG
EEGATLATQDHLGEEYGISEKRSGYSYSRLLRYERRHRAQQRAIRAEELE
SAKKRKKSKKKGDGAGEGVGGAHDDGHGNEPGSGSRRVTGTRKRCFDHRG
TEEAAKGEGQRQQQEKGKERGRRLVWLSLSLLFSSLRSFNLSLFLSKAVC
STGGSALFIWKRGWY*