prot_H-elongata_contig197413.5508.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197413.5508.1
Unique Nameprot_H-elongata_contig197413.5508.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
[Close]
BLAST of mRNA_H-elongata_contig197413.5508.1 vs. uniprot
Match: D7FIU2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU2_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 5.870e-6
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:    2 FLFKRILRNGHDSRFKDVRDQPIRFLVFFGVQ 33
            FLF RI R+GHDSRF  VRD+P++FLVF+ VQ
Sbjct:  135 FLFARIRRDGHDSRFNGVRDRPLKFLVFWFVQ 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197413.5508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIU2_ECTSI5.870e-668.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197413contigH-elongata_contig197413:961..1065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197413.5508.1mRNA_H-elongata_contig197413.5508.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197413 961..1074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197413.5508.1 ID=prot_H-elongata_contig197413.5508.1|Name=mRNA_H-elongata_contig197413.5508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
MFLFKRILRNGHDSRFKDVRDQPIRFLVFFGVQVM
back to top