prot_H-elongata_contig197113.5502.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197113.5502.1
Unique Nameprot_H-elongata_contig197113.5502.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig197113.5502.1 vs. uniprot
Match: D7G8U4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U4_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.660e-14
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:    1 QRVRPLVEIREFTRLAYVMALVGSARDTPLASRAVAAMLVRHWCDLEPCRLLQK 54
            +R R L+EI + TRL YVM LVG+ RD PLASRA+AAMLV HWCD  PC  LQK
Sbjct:   70 ERRRGLLEIDKATRLCYVMMLVGTGRDPPLASRAIAAMLVDHWCDKGPCAFLQK 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197113.5502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8U4_ECTSI1.660e-1466.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197113contigH-elongata_contig197113:117..293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197113.5502.1mRNA_H-elongata_contig197113.5502.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197113 117..293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197113.5502.1 ID=prot_H-elongata_contig197113.5502.1|Name=mRNA_H-elongata_contig197113.5502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
QRVRPLVEIREFTRLAYVMALVGSARDTPLASRAVAAMLVRHWCDLEPCR
LLQKVRLG*
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