prot_H-elongata_contig19693.5491.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig19693.5491.1
Unique Name	prot_H-elongata_contig19693.5491.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	144

Homology

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.580e-20
Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLKDV 140
            R     RE   Y+   P ++   F+VL YW     + V A T +V +PA  P+L  + +L+LGI+ATSCQ ERNFSA + L+   R ++ P KVE MM ++LNRHL+  ++++
Sbjct:  505 RRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVREL 617

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.650e-20
Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLKDV 140
            R     RE   Y+   P ++   F+VL YW     + V A T +V +PA  P+L  + +L+LGI+ATSCQ ERNFSA + L+   R ++ P KVE MM ++LNRHL+  ++++
Sbjct:  700 RRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVREL 812

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 7.860e-19
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLKDV 140
            R     RE   Y+  T  +   DF+VL +W     + V + T  V +PA  P+L  + +L LGI+A+SCQ ERNFSA S L+   R ++   KVE MM ++LNRHL+  ++++
Sbjct:  123 RRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVREL 235

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.210e-18
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLK 138
            R     RE   Y+   P ++  DF++L +W     + V A T +V +PA  P+L  + +LHLGI+ATSCQ ERNFSA + L+ D   ++   +VE MM ++LN+HL+  ++
Sbjct:  501 RRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVR 611

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.760e-18
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLN 130
            R     RE   Y+   P ++  DF++L +W     + V A T +V +PA  P+L  + +LHLGI+ATSCQ ERNFSA + L+ D R ++   +VE MM ++LN
Sbjct:  118 RRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.920e-18
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLKDV 140
            R     RE   Y+  T  +   DF+VL +W     + V + T  V +PA  P+L  + +L LGI+A+SCQ ERNFSA S L+   R ++   KVE MM ++LNRHL+  ++++
Sbjct:  688 RRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVREL 800

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.370e-17
Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLK 138
            R     RE   Y+   P ++   F+++ +W     + V A T +V +PA  P+L  + +LHLGI+ATSCQ ERNFSA + L+ + R ++ P +VE MM ++LNR ++  ++
Sbjct:  397 RRVLIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVR 507

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 8.770e-17
Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLK 138
            R     RE   Y+   P ++   F+++ +W       V   T +V  PA  P+L  + +LHLGI+ATSCQ ERNFSA + L+   R ++   KVE MM ++LNRHL+  ++
Sbjct:  383 RHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVR 493

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 7.570e-16
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLK 138
            R     RE   Y+   PA   +DF +L++W+        A+T EV      PHL L+ +L  GI++TSCQ ERNFSA + L+   RS + P KVE +M L+LNR  IP +K
Sbjct:  363 RGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVK 471

[Close]

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.400e-16
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0

Query:   28 RSTAAAREFEEYMQATPAINSHDFDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPERNFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLK 138
            R     RE   Y+   PA   +DF +L++W+        A+T EV      PHL L+ +L  GI++TSCQ ERNFSA + L+   RS + P KVE +M L+LNR  IP +K
Sbjct:  691 RGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVK 799

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot

BLAST of mRNA_H-elongata_contig19693.5491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A6H5JTB8_9PHAE	1.580e-20	40.71	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JGG8_9PHAE	1.650e-20	40.71	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5KJT6_9PHAE	7.860e-19	38.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQI6_9PHAE	1.210e-18	38.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7P7_9PHAE	1.760e-18	40.78	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JRT6_9PHAE	5.920e-18	38.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXV5_9PHAE	1.370e-17	36.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDJ6_9PHAE	8.770e-17	37.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAN7_9PHAE	7.570e-16	41.44	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	8.400e-16	41.44	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 79..127 e-value: 1.4E-4 score: 21.6
None	No IPR available	PANTHER	PTHR47611	FAMILY NOT NAMED	coord: 30..128
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 32..133

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig19693	contig	H-elongata_contig19693:259..690 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig19693.5491.1	mRNA_H-elongata_contig19693.5491.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig19693 259..693 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig19693.5491.1 ID=prot_H-elongata_contig19693.5491.1|Name=mRNA_H-elongata_contig19693.5491.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MERIPRERSLLVSPPDNTEDDAREDYLRSTAAAREFEEYMQATPAINSHD
FDVLKYWKNHVIEGVDAKTAEVITPARRPHLGLLVKLHLGIDATSCQPER
NFSAFSALLSDRRSHLSPEKVETMMPLKLNRHLIPGLKDVLAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf