prot_H-elongata_contig19639.5475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19639.5475.1
Unique Nameprot_H-elongata_contig19639.5475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length312
Homology
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: D7G2X4_ECTSI (Proteasome Alpha Subunit family member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X4_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 4.590e-92
Identity = 174/300 (58.00%), Postives = 193/300 (64.33%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYKVAR----REREVAEYPVAHGDNRHA---------------------DDERRGQKCRGSE-----GGESGKLLLEN----------ASSENGERIESEDLGAGVTVSESEGPPNANGHERSVIGLGVVGEEETVQLALQALSKVS 260
            MRAVGHYGCP+VGVHGE CCVV CKRDLPD+LVY DSVTSIFRITD IYSAATGM+GDVRYQVKRARLQALEYKRQYGS MPSRLLALAMADAAQVNTQHAA+RPMACVSLIISVDDPTGP L R+EPSGQVFQAWGTA GRGSA S +FLEEA K A     R     E   + G + H                      DD+ +G+    +      G   G  + ++             E   R    + G  +T    E  P   G   +  G GVVGE ETV+LALQALSK S
Sbjct:   36 MRAVGHYGCPAVGVHGEGCCVVACKRDLPDELVYPDSVTSIFRITDDIYSAATGMTGDVRYQVKRARLQALEYKRQYGSSMPSRLLALAMADAAQVNTQHAALRPMACVSLIISVDDPTGPALFRIEPSGQVFQAWGTAVGRGSAASSDFLEEALKAAASRDGRGNSRQESTSSVGGDEHRTPDKDYFPGVPNPSVMNAEKEDDDGQGRTTSDAPAHEIVGDREGDEISDDDVDADNVDVQGPDEETHRKRGSEAGGKMTEPSDESTPGDGGEIGT--GFGVVGEMETVELALQALSKRS 333          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A6H5JKK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK2_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 9.980e-89
Identity = 176/326 (53.99%), Postives = 204/326 (62.58%), Query Frame = 0
Query:   23 VCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYKVA-----RREREVAEYPVAHGDNRHADD---------------ERRGQKCRGSE-----------GGESGKLLLENASSENGE---------RIESEDLGAGVTVSESEGPPNANGHERSVIGLGVVGEEETVQLALQALSKVSSSEGPAALNCENVEVAIASRDSG-IRVCSRTEVKGFLGRMACSPGFPP 307
            +C++D   +LVY DSVTSIFRITD IYSAATGM+GDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAA+RPMACVSLIISVDDPTGP L R+EPSGQVFQAWGTAAGRGSA S +FLEEA K       R            GD     D               E++G   +G             G E  ++  ++  ++N +         R    + G  +     E  P   G   +  G GVVGE ETV+LALQALSK SS +G  AL   NVE+ IAS+ +G +RVCSR EVKGFLG+M  S   PP
Sbjct:   21 ICRQD---ELVYPDSVTSIFRITDDIYSAATGMTGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAALRPMACVSLIISVDDPTGPALFRIEPSGQVFQAWGTAAGRGSAASSDFLEEALKAGATRDGRGNSRQDSTSSGGGDEHRTQDKDYFPGVPKTSVTNVEKKGDDGQGHTTSDAPAHEIVGGREGNEISADDVDADNVDVQGPDEETHRRRGSEAGGKMREPPDESTPVDGGEIGT--GFGVVGEMETVELALQALSKASSGKGAPALTDRNVEIVIASKQTGKVRVCSRKEVKGFLGKMTFSADCPP 341          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A7S2V3B1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3B1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.920e-29
Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEE 153
            + AV +YG P + + G    V V  +++PD LV ADS+  IF+++D I  A +G+ GDV+ Q  RAR+ +L  + Q G   P  LLA  +AD AQV TQ    RP+  V L++S     GP L RVEP+GQ  + W TA GR    +++ LE+
Sbjct:    2 LSAVNNYGAPCIAIKGRDFVVSVMMKNIPDSLVEADSINGIFKVSDYILCAISGLEGDVQEQAYRARIASLRLRGQLGYSAPLPLLARTLADQAQVRTQVMERRPLGVVCLLMSASPELGPELYRVEPNGQFLKCWATACGREQEEALQLLED 154          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A067BYZ3_SAPPC (Proteasome subunit alpha type n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BYZ3_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 3.510e-28
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYK 156
             +AV      SV V G   CVVV ++ +PD L+  DSVT+IF+IT  I    TG+  D + QV+R R +A +++ +YG P+P  +LA  +AD +QV TQHA+MR +  V+++ISVD+  GP L +++P+G  +    TAAG     +  +LE+  K
Sbjct:   26 FKAVKESSLTSVAVRGAKSCVVVTQKKVPDKLIDPDSVTNIFKITPLIGCLMTGLYADAKAQVQRLRYEAHDFEHKYGYPVPCHVLAKRLADISQVYTQHASMRALGVVTMLISVDEEKGPQLYKIDPAGHFWGYKATAAGVKDQEATNYLEKKIK 181          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A835YUN1_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.340e-27
Identity = 60/152 (39.47%), Postives = 91/152 (59.87%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLE 152
             +A    G  SV V G+  CVVV ++ +PD L+   SVT++FR+TD +    TGM+ D R  V+R R +A E++ +YG  +P   LA   AD  QV TQ A++R +ACV+L+++VDD  GP + +V+P+G  F     A+G     +V + E
Sbjct:   27 FKAASSSGLTSVAVRGKDACVVVTQKKVPDRLIDPASVTNLFRVTDRVGCLMTGMTADARASVQRLRYEAHEFRFKYGYDVPVGTLARRFADICQVYTQQASLRALACVALLVAVDDEKGPQVFKVDPAGHFFPYKAAASGAKEQEAVNWFE 178          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A024T812_9STRA (Proteasome subunit alpha type n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024T812_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.960e-26
Identity = 59/156 (37.82%), Postives = 95/156 (60.90%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYK 156
             +AV      SV V G   CVVV ++ +PD L+  DSVT+IF+IT  I +  TG+  D + QV+R R +A E++ ++G P+P  +LA  +AD +QV TQHA+MR +  ++++I +D+  GP L +++P+G       T+AG     +  +LE+  K
Sbjct:   26 FKAVKESNLTSVAVRGAKSCVVVTQKKVPDKLIDPDSVTNIFKITPAIGALLTGLYADAKAQVQRLRYEAHEFEHKFGYPVPVHVLAKRLADISQVYTQHASMRALGVITILIGIDEEKGPQLYKIDPAGNFRGYKATSAGVKDQEATNYLEKKIK 181          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: UPI000D71E357 (proteasome subunit alpha type-6-like n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI000D71E357)

HSP 1 Score: 113 bits (283), Expect = 2.010e-26
Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYKVAR 159
             RA+   G  +V V GE    VV ++ +PD L+   +VT+++R+T+TI  A TGMS D R QV+RAR +A E+K + G  +P+ +L   MAD +QV TQ+A MRP+ C  ++I +D   GP L + +P+G       T AG     +  FLE+  K  R
Sbjct:   13 FRAISQGGLTTVAVRGEESVAVVTQKKVPDTLLDPSTVTNLYRLTETIGCAMTGMSADGRSQVQRARHEAAEWKYKKGYEIPAAMLCRRMADISQVYTQNAEMRPLGCCMILIGIDPELGPQLFKCDPAGYYCGYKATTAGAKQTEANSFLEKTLKKKR 171          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: K7F3C8_PELSI (Proteasome subunit alpha type n=18 Tax=Testudines TaxID=8459 RepID=K7F3C8_PELSI)

HSP 1 Score: 113 bits (283), Expect = 2.930e-26
Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYKVAR 159
             RA+   G  +V V GE    VV ++ +PD L+   +VT+++R+T+TI  A TGMS D R QV+RAR +A E+K + G  +P+ +L   MAD +QV TQ+A MRP+ C  ++I +D   GP L + +P+G       T AG     +  FLE+  K  R
Sbjct:   29 FRAISQGGLTTVAVRGEESVAVVTQKKVPDTLLDPSTVTNLYRLTETIGCAMTGMSADGRSQVQRARHEAAEWKYKKGYEIPAAMLCRRMADISQVYTQNAEMRPLGCCMILIGIDPELGPQLFKCDPAGYYCGYKATTAGAKQTEANSFLEKTLKKKR 187          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: A0A1P8B073_ARATH (Proteasome subunit alpha type n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A1P8B073_ARATH)

HSP 1 Score: 112 bits (280), Expect = 3.040e-26
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYK 156
             +AV   G  S+GV G+    VV ++ +PD L+   SV+ +F +T  +   ATGM+ D R  V++AR +A E++ QYG  MP+ +LA  +AD +QV TQHA MRP+  V++++ +D+  GPLL + +P+G  +    T+AG     +V FLE+  K
Sbjct:   29 FKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMK 184          
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Match: F4IIA5_ARATH (Proteasome subunit alpha type n=2 Tax=Brassicaceae TaxID=3700 RepID=F4IIA5_ARATH)

HSP 1 Score: 112 bits (280), Expect = 4.410e-26
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYSAATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQHAAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEFLEEAYK 156
             +AV   G  S+GV G+    VV ++ +PD L+   SV+ +F +T  +   ATGM+ D R  V++AR +A E++ QYG  MP+ +LA  +AD +QV TQHA MRP+  V++++ +D+  GPLL + +P+G  +    T+AG     +V FLE+  K
Sbjct:   29 FKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMK 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19639.5475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X4_ECTSI4.590e-9258.00Proteasome Alpha Subunit family member n=1 Tax=Ect... [more]
A0A6H5JKK2_9PHAE9.980e-8953.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V3B1_9STRA7.920e-2941.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067BYZ3_SAPPC3.510e-2840.38Proteasome subunit alpha type n=4 Tax=Saprolegniac... [more]
A0A835YUN1_9STRA7.340e-2739.47Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A024T812_9STRA1.960e-2637.82Proteasome subunit alpha type n=11 Tax=Aphanomyces... [more]
UPI000D71E3572.010e-2639.62proteasome subunit alpha type-6-like n=1 Tax=Pelod... [more]
K7F3C8_PELSI2.930e-2639.62Proteasome subunit alpha type n=18 Tax=Testudines ... [more]
A0A1P8B073_ARATH3.040e-2639.10Proteasome subunit alpha type n=1 Tax=Arabidopsis ... [more]
F4IIA5_ARATH4.410e-2639.10Proteasome subunit alpha type n=2 Tax=Brassicaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 10..158
e-value: 6.4E-31
score: 107.3
NoneNo IPR availablePANTHERPTHR11599:SF11PROTEASOME SUBUNIT ALPHA TYPE-6coord: 2..157
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 2..157
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 2..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19639contigH-elongata_contig19639:2151..5411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19639.5475.1mRNA_H-elongata_contig19639.5475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19639 2091..5997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19639.5475.1 ID=prot_H-elongata_contig19639.5475.1|Name=mRNA_H-elongata_contig19639.5475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bp
MRAVGHYGCPSVGVHGEACCVVVCKRDLPDDLVYADSVTSIFRITDTIYS
AATGMSGDVRYQVKRARLQALEYKRQYGSPMPSRLLALAMADAAQVNTQH
AAMRPMACVSLIISVDDPTGPLLMRVEPSGQVFQAWGTAAGRGSATSVEF
LEEAYKVARREREVAEYPVAHGDNRHADDERRGQKCRGSEGGESGKLLLE
NASSENGERIESEDLGAGVTVSESEGPPNANGHERSVIGLGVVGEEETVQ
LALQALSKVSSSEGPAALNCENVEVAIASRDSGIRVCSRTEVKGFLGRMA
CSPGFPPKLGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N