prot_H-elongata_contig19627.5471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19627.5471.1
Unique Nameprot_H-elongata_contig19627.5471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.350e-39
Identity = 100/267 (37.45%), Postives = 148/267 (55.43%), Query Frame = 0
Query:    1 MSERGTNDPGH-AEDLLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIR 258
            ++  G N  GH    ++   A  +CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G  G   E I  RL+KV          TF+VGYAPT+TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  AA+ +L +++T+  TPK G      +    KE HR  LD+IL+RQ DRRLVRN +V       S+H LV  ++R
Sbjct:  100 LAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHDGY--VIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 360          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 9.970e-39
Identity = 90/230 (39.13%), Postives = 136/230 (59.13%), Query Frame = 0
Query:   15 LLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVR 238
            ++   A  +CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G  G   E I  RL+KV          TF+VGYAPT+TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  AA+ +L +++T++ TPK G ++   + +G KE HR  LD+IL+RQ DRRLVR
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHDGY--VIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK-GVHTFQSSNKG-KEKHR--LDFILMRQTDRRLVR 224          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.810e-38
Identity = 97/264 (36.74%), Postives = 146/264 (55.30%), Query Frame = 0
Query:    5 GTNDPGH-AEDLLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            G N  GH    ++   +   CD I +Q TRR G+  I       ++  S    G   K G+ GVG+V++E++  ++G +G   E I  RL+KV           F+VGYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A++ +L + +T+  TPK G      +    KE +R  LD+IL+RQ DRR VRN++V       S+H LV  ++RL
Sbjct:   95 GRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 352          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.930e-38
Identity = 93/244 (38.11%), Postives = 136/244 (55.74%), Query Frame = 0
Query:   24 CDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G +G   E I  RL+KV          TF+VGYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R    G  DA+VLG YGRD +++NG ++   A++ +  + +T+  TPK G      +    KE +R  LD+IL+RQ DRR VRN++V       S+H LV  ++RL
Sbjct:   12 CDVIGLQETRREGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.830e-38
Identity = 96/252 (38.10%), Postives = 142/252 (56.35%), Query Frame = 0
Query:   15 LLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIR 258
            ++   A  +CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G  G   E I  RL+KV          TF+VGYAPT+TA          K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  AA+ +L +++T+  TPK G      +    KE HR  LD+IL+RQ DRRLVRN +V       S+H LV  ++R
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHDGY--VIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 248          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.730e-38
Identity = 95/246 (38.62%), Postives = 137/246 (55.69%), Query Frame = 0
Query:   24 CDFIAIQGTRRNGRTIIQAPAASD--IVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            CD I +Q TRR G    Q   A D  ++  S    G   K G+ GVG+ ++E++  ++G  G   E I  RL+KV          TF+VGYAPT+T  T        K  FW  L   + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A+  +L + +T+  TPK G      +    KE +R  LD+IL+RQ DRR VRN++V       S+H LV  ++RL
Sbjct:   12 CDVIGLQETRREG----QGSLAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 4.820e-38
Identity = 96/268 (35.82%), Postives = 148/268 (55.22%), Query Frame = 0
Query:    1 MSERGTNDPGH-AEDLLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            ++  G N  GH    ++   +   CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G +G   E I  RL+KV          TF+VGYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A++ +L + +T+  TPK G      +    KE +R  LD+I +RQ DRR VRN++V       S+H+LV  ++RL
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC--DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRL 446          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.970e-37
Identity = 93/244 (38.11%), Postives = 139/244 (56.97%), Query Frame = 0
Query:   24 CDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            CD I +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G +G   E I  RL+KV          TF+VGYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A++ +L + +T+  TPK G      +    KE +R  LD+IL+RQ DRR VRN++V       S+H LV  ++RL
Sbjct:   12 CDVIGLQETRREGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 4.940e-37
Identity = 92/249 (36.95%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   19 AAKYECDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            A + +  F     TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G +G   E I  RL+KV          TF+VGYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A++ +L + +T+  TPK GG    F     K   ++CLD+IL+RQ DRR VRN++V       S+H LV  ++RL
Sbjct:   39 AREGDLSFGTFNETRREGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTFQSSN-KGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 281          
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 5.960e-37
Identity = 90/244 (36.89%), Postives = 138/244 (56.56%), Query Frame = 0
Query:   24 CDFIAIQGTRRNGRTIIQAPAASDIVHCSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIFKHRAATTFIVGYAPTKTAATCH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLSTPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPK--MKSNHRLVSVSIRL 259
            CD   +Q TRR G+  I       ++  S    G   K G+ GVG+ ++E++  ++G +G   E I  RL+KV          TF++GYAPT+T  T        K  FW  L + + EV + DHL+++MDANARTG R +G    DA+++G YGRD +++NG ++L  A++ +L + +T+  TPK G      +    KE +R  LD+IL+RQ DRR VR+++V       S+H LV  ++RL
Sbjct:   12 CDVTGLQETRREGQGSIAHDGY--VIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC--DAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19627.5471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE3.350e-3937.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KP87_9PHAE9.970e-3939.13Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE1.810e-3836.74Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KBZ6_9PHAE1.930e-3838.11Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE2.830e-3838.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K259_9PHAE3.730e-3838.62Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE4.820e-3835.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE2.970e-3738.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCV1_9PHAE4.940e-3736.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KSV0_9PHAE5.960e-3736.89Endo/exonuclease/phosphatase domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 8..259
e-value: 2.2E-20
score: 75.0
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 16..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19627contigH-elongata_contig19627:2746..3522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19627.5471.1mRNA_H-elongata_contig19627.5471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19627 2722..3522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19627.5471.1 ID=prot_H-elongata_contig19627.5471.1|Name=mRNA_H-elongata_contig19627.5471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
MSERGTNDPGHAEDLLIFAAKYECDFIAIQGTRRNGRTIIQAPAASDIVH
CSDHCDGDGGKSGILGVGMVVRESIARALGSDGIVPEHIRERLLKVSGIF
KHRAATTFIVGYAPTKTAATCHKSKFWKELRSTVAEVPASDHLILMMDAN
ARTGGRGEGAGLGDARVLGPYGRDTVDDNGLQILACAAEYKLPIVSTFLS
TPKRGGNSDAFTYEGPKESHRWCLDYILVRQHDRRLVRNITVHPKMKSNH
RLVSVSIRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf