prot_H-elongata_contig1962.5468.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1962.5468.1
Unique Nameprot_H-elongata_contig1962.5468.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1024
Homology
BLAST of mRNA_H-elongata_contig1962.5468.1 vs. uniprot
Match: D7FW09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW09_ECTSI)

HSP 1 Score: 693 bits (1789), Expect = 8.940e-230
Identity = 474/1145 (41.40%), Postives = 630/1145 (55.02%), Query Frame = 0
Query:    8 SAHLEYNLGLYQEAQRSIERALRLGHEDSGPMQIRLARIHMRKHKADTSNLKRDISGALAAFCAALSFTDIALRPVHYLEVASAYLKLNETQQAIKALATILIRWPVLLINTS--APSKFDSVDGDDHAEVDLPMARNILGNESIFLQMGLCYEIVGNVKVAKKAYLQAWNKLVERRKGELQ----GSLSAKAEDS-----------DYIEAILGHANAALRVVHPRGGAQTTGAPGSKDAASLPGD----SPYGSLERLRTPSPGYR--ENVIFFEKPGSRSVLASTRAGRSPNRGRIRSDREINNFTAAAEE----AKKKR--GFKLWLEEPYTWYRIGEALLSGKCFALALVFLDKTLDMLPPGLEQQEKGRFSDAHAEAEHARELDPLGERVKRLCPRLMALHSEDARSQAT-----TVCIQRAWRGHWKLHVLKDLVTRQIAAMRTQRFMRKWIRYNHWLILRRIAASATELSDAKGAHSRGLGVTATAFIAKRLQVMIEPAILVQRAVRVFLARQMARRRREAIVTLQAFQRGCQGRAALRAVLEEGCG---VLHMGRNTGSHSDDGKD--IVSGFRSVNQNLNHTSSENVSLKECTAPS------------------------------VGNLIRYSLPMDAGCPGGFGLPDLSAFLWDS-----------SGKEND----------DLDAAAAHSAAGGRISYTGTVPGGGVFELSVRALKSTR-----------------GDGSVSLERKQLPLAW----------------PDWVSPAIASEISLAQALDCSMLVINCPSFCSVCSRRLFSRIGRLKIEAAERQNPVPFSISRVAKGDIARDQEERHNTARIATPGKDPNGKRPRVLGEHLEC--------IMVLGYSPVGNAALLELSSALQHGSLSCLSTLVIGGPACRVGPRGINSLARALSSAGCLSLRHLSLSYCCLGRRLTRRVSLSSSPSLSLSSSLALKRVAATAAAHEAWGVFFRHLQYMSTLSTLSLQSCGLTDSDMSAVSIAIQTLPVCRLRCLRLNRNCVGAPGLRILLRALTSRRIRIPALWLRQQQPAMVESQVRETVNEAFAEGLWAEVEFERPMDAMGGRTRLLLMEHTSESEGLGRRAVKHTTSNIYL 1021
            +AHL Y LGLY EA+ SIERAL LGHE+ G MQ+RLAR+H+R+ KAD++N +R +  ALA++  A+ F  +A   VHYLEV S YLKLNETQ+A  AL+T+L+RWP LL++           ++GD  AEVDLP+A N+LG ESIFLQMG C+E +   K+A +AY QAWN L+E+R         G++ AK   S           D I AIL  A  AL        +++T A G +   S P      S   S    R PS G +  +  +   + G  S L ST       RG  R D   ++     +E    A K R  GF+LW + PYTW+  GE +L G C+AL L FL K + +LP GL QQEKGRF DAH+ AE AR+LDP G+ V+ LCPRLMALHS DAR Q T      + +QRAWRGH  + VL DLV++Q AA+R QRFMR+W ++   L LR +A SA ELS     +++ +G+ A A  A RLQ +   A  VQRA RV +A +   RR+EAI  LQAF RGC+ R AL A  EE      V H  R      D G++    +    V    +     N   +    PS                              +G + R + PMDAGC  GF  P+L+AFLW+S            G +++          + ++  ++  +  R S+      G VFE S  A+ S+                  GD S        P A+                P WV   +A E +  +AL CS L++N PSF S  +RRLFSR+G+  I AA      P   +   KG  A     R       T G++   K  R L +H  C        ++++G SP+G+  L ELSSA++ G L  L+TLVIGGP C+VGPRG+ +LA ALS++GC  L+HLS+S CCLGR+             SL +  ++    A A AH AW  FFRHLQ + +L+TLS+Q  GL + D+ ++SIA+Q LP  RLRCLRLN NCVG  GLR+LL ALTSRR R+PALWLR+Q+PA+VES  R+    AF +GL+AEVEFERP + MGGR+ L L+E T+E+E LGRRA+KH TS+IY+
Sbjct:   24 TAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSANAERHLRSALASYSEAMKFVRVASEAVHYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGD-RAEVDLPVASNVLGGESIFLQMGFCFETLRQDKMAAEAYRQAWNTLLEQRHASAAPAGYGAVFAKTAKSGGGKEVGVVGVDEIGAILRQAQLALAA-----SSRSTSAAGGRSRDSTPEQQLQRSKGTSSTERRPPSSGQQPDQQGVGGGRGGVPSSLPSTADSSCLGRGGGRGDHGDSSCGVTKKETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLAKAVALLPSGLHQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQYTRESQSALRVQRAWRGHRVIRVLHDLVSKQTAALRIQRFMREWRKHGFILALRLVATSALELSKLGAKYTKAMGLAAQAAAADRLQALTASAEAVQRAARVLIAHRRVSRRKEAIAALQAFCRGCRLRWALSAAFEESLRLEYVAHDLRQQRDCGDGGREEGAYTCEEGVEPGPDREGVGNTDREGKRGPSAAPLRPRHGDGCKPHKEEAFAGYNAPLNVQLGVIARRNFPMDAGCAKGFRPPNLAAFLWESREEAYGSCCADDGTDDNPTLLVPHLGNETESPRSYVDSAARSSHGDD---GAVFEASATAVASSACREDPVRMGSEQNEVDLGDCSPDQHGGGRPPAFDELPASPVSPLPLLQPPRWVPATVAPEGAFHRALACSTLIVNSPSFDSSSARRLFSRMGK-PIPAASPPRDEPQQEADDVKGMAA--GVRRGKADLNPTHGEE---KEKRRLKKHPGCLHANGLKHVLLVGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRQKQXXXXXXXGCKTSLLNPASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGARDIFEGAFRDGLFAEVEFERPFEVMGGRSHLALIECTTETEDLGRRALKHPTSHIYI 1153          
BLAST of mRNA_H-elongata_contig1962.5468.1 vs. uniprot
Match: A0A6H5JP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP04_9PHAE)

HSP 1 Score: 634 bits (1635), Expect = 3.570e-206
Identity = 458/1209 (37.88%), Postives = 618/1209 (51.12%), Query Frame = 0
Query:    8 SAHLEYNLGLYQEAQRSIERALRLGHEDSGPMQIRLARIHMRKHKADTSNLKRDISGALAAFCAALSFTDIALRPVHYLEVASAYLKLNETQQAIKALATILIRWPVLLINTS--APSKFDSVDGDDHAEVDLPMARNILGNESIFLQ--------------------------------MGLCYEIVGNVKVAKKAYLQAWNKLVERRKGELQGSLSAKAEDSDYIEAILGHANAALRVVHPRGGAQTTGAPGSKDAASLPGDSPYGSLERLRTPSPGYRENVIFFEKPGSRSVLASTRAGRSPNRGRIRSDREINNFTAAAEEAKKKRGFKLWLEEPYTWYRIGEALLSGKCFALALVFLDKTLDMLPPGLEQQEKGRFSDAHAEAEHARELDPLGERVKRLCPRLMALHSEDARSQA-------TTVCIQRAWRGHWKLHVLKDLVTRQIAAMRTQRFMRKWIRYNHWLILRRIAASATELS---------------------DAKGA-------------HSRGLGVTATAFIAKRLQVMIEPAILVQRAVRVFLARQMARRRREAIVTLQAFQRGCQGRAALRAVLEEGCGVLHM-------------GRNTGSHSD--------DGKDIVSGFRSVNQNLNHTSSENVSLKEC----------TAP---SVGNLIRYSLPMDAGCPGGFGLPDLSAFLWDSS------------------------GKENDD----LDAAAAHSAAGGR-----ISYTGTVP----------GGGVFELSVRALKSTRGDGSVSLERKQLP---------LAWPDWVSPAIASEISLAQALDCSMLVINCPSFCSVCSRRLFSRIGRL-------KIEAAERQNPVPFSISRVAKGDIARDQEERHNTARIATPGKDPNGKRPRVLGEHLECIMVLGYSPVGNAALLELSSALQHGSLSCLSTLVIGGPACRVGPRGINSLARALSSAGCLSLRHLSLSYCCLGRRLTRRVSLSSSPSLSLSSSLALKRVAATAAAHEAWGVFFRHLQYMSTLSTLSLQSCGLTDSDMSAVSIAIQTLPVCRLRCLRLNRNCVGAPGLRILLRALTSRRIRIPALWLRQQQPAMVESQVRETVNEAFAEGLWAEV---------------------------EFERPMDAMGGRTRLLLMEHTSESEGLGRRAVKHTTSNIYL 1021
            +AHL Y LGLY EA+ SIERAL LGHE+ G MQ+RLAR+H+R+ KAD+++ +R +  ALA++  A+ F  +A   +HYLEV S YLKLNETQ+A  AL+T+L+RWP LL++T          ++GD  AEVDLP+A  +LG ESIFLQ                                MGLC+E +   K+A +AY QAWN L+E+R        +A A          G  +   R  +    A+T  + G K+   +  D   G++ R        +  +       S S         +P +   RS     N T       +  GF+LW + PYTW+  GE +L G C+AL L FL K + +LP GL QQEKGRF DAH+ AE AR+LDP G+ V+ LCPRLMALHS DAR QA       + + +QRAWRGH  + VL+DLV++QIAA R QRFMR+W ++   L LR  A SA EL                      D +               +++ +G+TA A  A RLQ +   A  VQRA R  +A +   RR+EAI  LQAF RGC+ R AL A  EE   +  +             GR  G+H+         D + + +  R   + L+ TS        C           AP    +G + R +LPMD  C  GF  P+L+AFLW+S                         GKE +     +DAA A S+ G        S T              G    E+ +    S +  G       +LP         L  P WV   +A E +  +AL CS L+++ PSF S  +RRLFSR+G+        + E  +  + V    + V +G +  +        R+    K P G    +    LE I++LG SP+G+  L ELSSA++ G L  L+TLVIGGP C+VGPRG+ +LA ALS++GC  L+HLS+S CCLGR   RR           S+  ++    A A AH AW  FFRHLQ + +L+TLS+Q  GL + D+ ++SIA+Q LP  RLRCLRLN NCVG  GLR+LL AL SRR R+PALWLR+Q+PA+VES  RE    AF +GL+AEV                           EFERP + MGGR+ L L+E T+E+E LGRRA+KH TS+IY+
Sbjct:   24 TAHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSASAERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVLLRWPALLVDTENDGHGSVPVIEGD-RAEVDLPVASYVLGGESIFLQARLTKLASRTRYSLFESEPHRYRIRRSVTPNAMGLCFETLRQDKMAAEAYRQAWNTLLEQRHAS-----AAPAGQKPXXXXXTGDPSK-TRTGYGAVFAKTAKSGGGKEVGVVRVDE-IGAILR--------QAQLALAASSRSTSAAGGRSRDSTPEQQLQRSGGVTKNKTIVDAAKARALGFELWCKNPYTWFNYGEVVLEGGCYALTLAFLAKAVALLPSGLLQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRESQSALRVQRAWRGHRVIRVLRDLVSKQIAAFRIQRFMREWRKHGFILALRLAAISALELRQVVRRRRSRSWVWHERRAAWVDGEATLARIHAPPKLGTNYTKAMGLTAQAAAADRLQALAASAEAVQRAARALIAHRRVSRRKEAIAALQAFFRGCRLRWALSAAFEESLRIESVARDLRQQRDCGDGGREEGAHTCEEGVKPGLDPEGVGNTDREGKRGLSATSLRPRHGDGCKPHKDTFGGYNAPPNVQLGVITRRNLPMDVSCAKGFRPPNLAAFLWESREDAYGSRCADDGADDNTALLAPHLGKEKESPRSYVDAAVARSSHGHDHAVFVASATAVASSACREDLARMGSEQNEVDLGDCLSDQHGGGRPPAFDELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQETDDVKGMAAGVRRGQVDLNLTHGEEKERLI---KHPTGC---LYANGLEHILLLGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRPKGRRXXXXXXXXXXXSNLASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALRSRRRRLPALWLRRQRPALVESGAREIFERAFRDGLFAEVKRVPHPMNIERIEGKFRAANRNTWWLVEFERPFEVMGGRSHLALIERTTETEDLGRRALKHPTSHIYI 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1962.5468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW09_ECTSI8.940e-23041.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP04_9PHAE3.570e-20637.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 793..822
e-value: 35.0
score: 6.3
coord: 915..942
e-value: 1.0
score: 17.1
coord: 885..912
e-value: 13.0
score: 9.3
NoneNo IPR availableGENE3D1.20.5.190coord: 477..525
e-value: 1.2E-5
score: 26.9
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 771..941
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 886..906
e-value: 1.0
score: 9.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 499..525
score: 6.906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1962contigH-elongata_contig1962:4049..10907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1962.5468.1mRNA_H-elongata_contig1962.5468.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1962 4049..10907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1962.5468.1 ID=prot_H-elongata_contig1962.5468.1|Name=mRNA_H-elongata_contig1962.5468.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1024bp
MLLWVLSSAHLEYNLGLYQEAQRSIERALRLGHEDSGPMQIRLARIHMRK
HKADTSNLKRDISGALAAFCAALSFTDIALRPVHYLEVASAYLKLNETQQ
AIKALATILIRWPVLLINTSAPSKFDSVDGDDHAEVDLPMARNILGNESI
FLQMGLCYEIVGNVKVAKKAYLQAWNKLVERRKGELQGSLSAKAEDSDYI
EAILGHANAALRVVHPRGGAQTTGAPGSKDAASLPGDSPYGSLERLRTPS
PGYRENVIFFEKPGSRSVLASTRAGRSPNRGRIRSDREINNFTAAAEEAK
KKRGFKLWLEEPYTWYRIGEALLSGKCFALALVFLDKTLDMLPPGLEQQE
KGRFSDAHAEAEHARELDPLGERVKRLCPRLMALHSEDARSQATTVCIQR
AWRGHWKLHVLKDLVTRQIAAMRTQRFMRKWIRYNHWLILRRIAASATEL
SDAKGAHSRGLGVTATAFIAKRLQVMIEPAILVQRAVRVFLARQMARRRR
EAIVTLQAFQRGCQGRAALRAVLEEGCGVLHMGRNTGSHSDDGKDIVSGF
RSVNQNLNHTSSENVSLKECTAPSVGNLIRYSLPMDAGCPGGFGLPDLSA
FLWDSSGKENDDLDAAAAHSAAGGRISYTGTVPGGGVFELSVRALKSTRG
DGSVSLERKQLPLAWPDWVSPAIASEISLAQALDCSMLVINCPSFCSVCS
RRLFSRIGRLKIEAAERQNPVPFSISRVAKGDIARDQEERHNTARIATPG
KDPNGKRPRVLGEHLECIMVLGYSPVGNAALLELSSALQHGSLSCLSTLV
IGGPACRVGPRGINSLARALSSAGCLSLRHLSLSYCCLGRRLTRRVSLSS
SPSLSLSSSLALKRVAATAAAHEAWGVFFRHLQYMSTLSTLSLQSCGLTD
SDMSAVSIAIQTLPVCRLRCLRLNRNCVGAPGLRILLRALTSRRIRIPAL
WLRQQQPAMVESQVRETVNEAFAEGLWAEVEFERPMDAMGGRTRLLLMEH
TSESEGLGRRAVKHTTSNIYLGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR000048IQ_motif_EF-hand-BS