prot_H-elongata_contig195451.5451.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig195451.5451.1
Unique Nameprot_H-elongata_contig195451.5451.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.420e-23
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    4 VANTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            V +  +WHRR+GH++ +SLDILRK  G G+ + G +S CDVCAVG ++Q  HP  A++  +RPFQL   DLMGPF+P  +GG
Sbjct:  263 VKSAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGG 344          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.740e-18
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    3 AVANTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            A  N   WHR L HL  +S+++LRK+   G++F  +++ CD+CA+ K++QLAHP   N +   P QL Y D MG  TP+  GG
Sbjct:  304 ATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGG 386          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.050e-15
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    6 NTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            N    HRRLGHL  +S+ +LRK+    ++F  +++ CD+CA+ K+ QLAHP   + +   P  L Y D+MG  TP+  GG
Sbjct:  105 NANTPHRRLGHLNFRSMKLLRKKEENEVDFSDSMTPCDICAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGG 184          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A507DNU9_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DNU9_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 2.040e-9
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    5 ANTQVWHRRLGHLYVQSLDIL-RKRYGTGINFEGAV--SDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            A  + WHRRLGHL  QS+ ++ R     G+   GA+  + C  CA+GKA +L  P   + + +   +L + D+ GP   + IGG
Sbjct:  363 ATLETWHRRLGHLNCQSVQLMARNGLVLGVEAVGALETAPCSTCALGKATKLPFPKDRSSRASEVLELVHSDVCGPMRTLTIGG 446          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A507DLD9_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DLD9_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 1.100e-7
Identity = 29/84 (34.52%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    5 ANTQVWHRRLGHLYVQSLDIL-RKRYGTGINFEGAV--SDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            A  + WHRRLGHL  QS+ ++ RK    G+   G +  + C   A+GKA +L  P   + + +   +L + D+ GP   ++IGG
Sbjct:   67 ATLETWHRRLGHLNCQSIQLMARKGLVQGMEAVGVLETAPCLTFALGKATKLPLPKECSSRASEVLELVHSDVCGPMRTLIIGG 150          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: UPI001016EA6F (uncharacterized protein LOC114172254 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=UPI001016EA6F)

HSP 1 Score: 54.7 bits (130), Expect = 3.100e-7
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    4 VANTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            V NT++WHRRLGH+  + L +L K+   G    G +  C+ C +GK ++L   ++  H      Q  + DL GP +PV+  G
Sbjct:   81 VDNTELWHRRLGHMSERGLAVLSKQGLLGGAVTGKLKFCESCVMGKKRRLKFCHS-KHTSTEKLQYVHSDLWGP-SPVLSHG 160          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A1W7R663_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R663_AEDAL)

HSP 1 Score: 55.8 bits (133), Expect = 4.100e-7
Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = 0
Query:    5 ANTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            +N ++WHRRLGHL V+S+  L +      +  G++S C  C  GK Q+L    ++  + N   ++ + DL GP     IGG
Sbjct:  378 SNLELWHRRLGHLNVESIKRLPRMVLGMDDLVGSMSPCVPCIEGKHQRLPF-KSSGRRANEILEVVHSDLCGPMEKTSIGG 457          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: UPI001E26FE34 (uncharacterized protein LOC123655756 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E26FE34)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-6
Identity = 27/86 (31.40%), Postives = 42/86 (48.84%), Query Frame = 0
Query:    6 NTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVS-----DCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDL------MGPFTP 80
            N+++WHRR+GHL +  L+ ++    TGI+F+   S     +C VC  GK  +L   N      N P  + + D         P+TP
Sbjct:  394 NSEIWHRRMGHLNINDLNKMKNGAVTGISFKDCASSKNKSNCKVCCEGKQSRLPFDNVGTRS-NEPLSIIHADAGIVHQKTNPYTP 478          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A8J5Y6F8_9ROSI (Integrase catalytic domain-containing protein n=4 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y6F8_9ROSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.460e-6
Identity = 27/74 (36.49%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    6 NTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSD--CDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGP 77
            NT +WHRRLGH+  +SLD+L K           V D  C+VC +GK  +L  P     +     +L + D+ GP
Sbjct:  451 NTDLWHRRLGHVNYRSLDLLHKMNMVDDMSRVEVKDTVCEVCQLGKQARLPFPANMAWRARDKLELVHSDVCGP 524          
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Match: A0A5H2XM59_PRUDU (Integrase catalytic domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XM59_PRUDU)

HSP 1 Score: 53.9 bits (128), Expect = 1.900e-6
Identity = 29/83 (34.94%), Postives = 43/83 (51.81%), Query Frame = 0
Query:    6 NTQVWHRRLGHLYVQSLDILRKR---YGTGINFEGAVSDCDVCAVGKAQQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG 85
            +T  WHRR GHL +QSL +L+++   YG       A   C  CA+GK+ + A       + + P +L + D+ GP     IGG
Sbjct:   38 STWYWHRRFGHLNMQSLKLLQQQELVYGLP-EIGNANRICQNCAIGKSHREAFGKEKIWRASLPLELVHSDVCGPMQTTSIGG 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig195451.5451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE2.420e-2352.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYD3_9PHAE1.740e-1843.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT61_9PHAE3.050e-1541.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A507DNU9_9FUNG2.040e-935.71DNA-directed DNA polymerase n=1 Tax=Powellomyces h... [more]
A0A507DLD9_9FUNG1.100e-734.52DNA-directed DNA polymerase n=1 Tax=Powellomyces h... [more]
UPI001016EA6F3.100e-735.37uncharacterized protein LOC114172254 n=1 Tax=Vigna... [more]
A0A1W7R663_AEDAL4.100e-734.57Putative retrovirus-related pol polyprotein from t... [more]
UPI001E26FE341.450e-631.40uncharacterized protein LOC123655756 n=1 Tax=Melit... [more]
A0A8J5Y6F8_9ROSI1.460e-636.49Integrase catalytic domain-containing protein n=4 ... [more]
A0A5H2XM59_PRUDU1.900e-634.94Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 5..50
e-value: 1.4E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig195451contigH-elongata_contig195451:189..446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig195451.5451.1mRNA_H-elongata_contig195451.5451.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig195451 3..650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig195451.5451.1 ID=prot_H-elongata_contig195451.5451.1|Name=mRNA_H-elongata_contig195451.5451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MNAVANTQVWHRRLGHLYVQSLDILRKRYGTGINFEGAVSDCDVCAVGKA
QQLAHPNTANHKVNRPFQLCYGDLMGPFTPVVIGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025724GAG-pre-integrase_dom