prot_H-elongata_contig19542.5447.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19542.5447.1
Unique Nameprot_H-elongata_contig19542.5447.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length303
Homology
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: D7FT67_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT67_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 5.520e-105
Identity = 191/326 (58.59%), Postives = 224/326 (68.71%), Query Frame = 0
Query:    1 MAAGHFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSED-----LVASAYSIGSTSGSGG-RMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQR--PTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVAGGIPE-RNIQFQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGEAEGAYLKVELVC-----VGGSSSSVARPVGVSLEEGGEGGGAEASKLQAGTRASMGA----------KKTRSGGGSKKPGWLKIN 302
            MAAGHFDADS ACV TLA+++DNVVHRP ++RTRQ+RC N+AF  KVGRI GGI FLEG+GFVS+ +            S G   GS G R LVLP +RED  LLK AR LL K A  LGVPR++MPQPPR R  P P  AG AS+  A FDPYKPF++ST PTPKG +E SLTEKRLQ LL KRA+VV+GG P+ RNIQF+LYVSPPR VLK  SSLS+AGLVPAALVYVSW+ VPP GEAEGAYLK ELV         ++++ ARPVGV+L+ G +  G+E SK   G+                   R+G    KP WLKIN
Sbjct:   23 MAAGHFDADSEACVTTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREDGPQXXXXXXXXXSGGDGRGSAGDRFLVLPPEREDAGLLKAARDLLSKQAEALGVPRERMPQPPRVRTSPPPRSAGQASA-AAAFDPYKPFMTSTAPTPKGPQESSLTEKRLQELLAKRAAVVSGGAPQDRNIQFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGEAEGAYLKRELVSGSTPGAAAAAAASARPVGVALDGGAK--GSEESKTGGGSAXXXSRLXXXXXXXXXXXKRTG----KPSWLKIN 341          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A6H5LNR6_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNR6_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 3.470e-78
Identity = 180/437 (41.19%), Postives = 215/437 (49.20%), Query Frame = 0
Query:    1 MAAGHFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSED------LVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVA------------------------------------------GG---------IPERNIQ------------------------------------------------------------------FQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGEAEGAYLKVELVC---VGGSSSSVARPVGVSLEEGGEGGGAEASKLQAGTRASMGAKKT---------RSGGGSKKPGWLKIN 302
            MAAGHFDADS ACV TLA+++DNVVHRP ++RTRQ+RC+N+AF  KVGRI GGI FLEG+GFVS+ E                    +G R LVL  +RED  LLK AR LL K A  LGVPR++MPQPPR RP+P    A  +  A FDPYKPF++ST PTPK  +E SLTEKRL+ LL KRA+VV                                           GG         I ER  Q                                                                  F+LYVSPPR VLK  SSLS+AGLVPAALVYVSW+ VPP GEAEG YLK EL+     G ++++ ARPVGV+L+ G +  G+E SK   G+                  R+G    KP WLKIN
Sbjct:   23 MAAGHFDADSQACVTTLAKVIDNVVHRPGDSRTRQIRCANAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLKAARDLLSKQAEALGVPRERMPQPPRARPSPPPPSAGQAAPAAFDPYKPFMTSTAPTPKDPQESSLTEKRLEELLAKRAAVVTLPSQXXXXXXXXXXXXFSVGAAGRERDGSSGMGXXXDGERGDGGLLAKKVARQIAERKKQDEVPFQTKAMRDIERLQKSTVYRTTVIKVQFPDRVVLQSTFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGEAEGGYLKRELLSGTTPGTAAAASARPVGVALDGGAK--GSEESKTGGGSAXXXXXXXXXXXXXXXXXRTG----KPSWLKIN 453          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A662X4H9_9STRA (PUB domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4H9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.980e-20
Identity = 74/240 (30.83%), Postives = 114/240 (47.50%), Query Frame = 0
Query:    6 FDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVAGGIPERNIQFQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGE--AEGAYLKVELV 243
            FDA S   + TL +IV N++  PD  + R +R SN+AF++ VG+++GG+EFL+ +GFV   E                 ++L L S ++ +  L+E   LL   A  L + R+  P    ++P           + +FD +K  I+               +  +  + E  AS  A      +  F LYV+PP   L    +L++  LVPAAL Y+SW  VPP  E  A G Y + +LV
Sbjct:   95 FDAVSRGAITTLMKIVTNILSHPDNEKLRSIRLSNAAFNRSVGQVKGGLEFLQSVGFVVVHET----------------QILTLRSVQDCKQKLEEGLRLLYIEADDLSIARETRPVVVEEKPA----------DPSFDVFKTQITRMQVRSAAFHPSETIQDVMNHVKECLASAYA------DHPFFLYVTPPTQKLAAEKTLADLNLVPAALTYLSWLEVPPQPEQAAVGFYFRPDLV 302          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A8J5JF70_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JF70_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.780e-17
Identity = 70/239 (29.29%), Postives = 112/239 (46.86%), Query Frame = 0
Query:    5 HFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVAGGIPERNIQFQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGEAE-GAYLKVEL 242
            +FDA S   V TL ++V N++   +  + R +R SN+AF++ VG+++GG+EFL  +GF    E                 +MLVL     D+++L+E   LL   A  L +P D  P           A    + +  FD +K  I+         +      + +Q +++     +A     +  +F LYV+PP   L    +L+E  LVPAAL Y+SW  VP    A  G Y++ +L
Sbjct:  248 NFDAVSRTAVTTLMKVVTNILSDLENDKVRSIRLSNAAFYRTVGQVKGGMEFLTSVGFAVVPET----------------QMLVLSPSPSDKSVLEEGLRLLSIEADDLNIPPDSRP-----------AVREKNADPNFDVFKTQITRV-------QASFHPNETIQDVIDHVTECLAAQY--KTSRFYLYVTPPTQKLATAKTLAELNLVPAALTYLSWLEVPQAEIASTGFYIRRDL 450          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: G4YTH0_PHYSP (UBX domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTH0_PHYSP)

HSP 1 Score: 89.0 bits (219), Expect = 4.340e-16
Identity = 84/319 (26.33%), Postives = 124/319 (38.87%), Query Frame = 0
Query:    4 GHFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKG--------------------------------------QEEQSLTEK-RLQALLE--------------------KRASVVAGGIPERNIQ------------------FQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGEAE--GAYLKVELV 243
            G FDA S   + TL +IV N++  P+  + R +R SN+AFH+ VG+++GG+EFL+ +GF    E                 + +VL    +D+ +L+E   LL+  A  L +  D  P    +R  P           +FD +K  I+     P+G                                      +EE   T+  R QA+ E                     RA + A   P   IQ                  F LYV+PP   L    +L++  LVPAAL Y+SW  +PP  E    G Y + +LV
Sbjct:  245 GSFDAVSRTAITTLMKIVTNILSDPENEKIRSIRLSNAAFHRSVGQVKGGLEFLQSLGFALVPET----------------QTIVLSPSPQDKGVLQEGLRLLNVEANDLNIAPDTRPTVREKRSDP-----------SFDVFKTQITRVQMQPRGPSTTEVLVDALKTXXXXXXXXXXXXXXXXXXXXXXXGRREEMEKTKNFRTQAMRELDELKRKKVFQTALIRVQFPDRAVMQASFHPNETIQDVMDHVTECLAEQFKGGKFYLYVTPPTQKLAPAKTLADLNLVPAALTYLSWSEMPPQAEVPSIGFYFRSDLV 536          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A5D6XXN3_9STRA (UBX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXN3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.760e-15
Identity = 84/282 (29.79%), Postives = 124/282 (43.97%), Query Frame = 0
Query:    6 FDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDL---VASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPP------------RQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQ-----EEQSLTEKRLQALLE-KRASVV---AGGIPERNIQ------------------FQLYVSPPRTVLKETSSLSEAGLVPAALVYVSWKNVPPPGEA--EGAYLKVELV 243
            FDA +   V TL +I+ NV+  P+  + R +R SN+ F + VG++RGG+EFL+ +GF    + L   + SA    +    G R+L   +D  +       +V++ + A       D  P+ P            +Q    G    A +   T  P +P  ++T     G+     EE S+  K L + L+ KRA      A   P   +Q                  F LYVSPPR  L    +L+E  LVPAAL Y+SW +  P  E    G+YL   LV
Sbjct:  247 FDATARGAVTTLMKILTNVLSHPENDKMRSIRVSNAVFQRSVGQLRGGVEFLQSVGFALDQDALYLVLQSAVDASAALQDGLRLLHTEADDLNIEEAARPQVIVPRAA---DPSFDAQPRGPSATEVLVDNLKSKQEQLLGHETPARNTVVTL-PGRPATAATATGDTGEDVAMDEEHSIDSKLLISTLKAKRAEAEKAKAAFHPNETVQAVLDHVTENLRPAFSSHAFYLYVSPPRQKLSPEKTLAELSLVPAALAYLSWVDAAPASETGVAGSYLCESLV 524          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A1Z5KM45_FISSO (UBX domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM45_FISSO)

HSP 1 Score: 83.2 bits (204), Expect = 3.090e-14
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 0
Query:    3 AGHFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQ------SLTEKRLQALLEKRASVVA 182
            A +FDA+S  C++TL +I+DN++ +P + + R +R  N+AF  KVG  +GGIEFL   GF    E  +A A  +   +GSG   LVL  D + + LL   R+L  +    LG+  +++P+  R+ P     G A S  A F+PY            G +        S T+  LQ LLEK+A + A
Sbjct:   23 ANNFDAESKVCLITLMKIIDNILQKPSDPKVRTIRLQNAAFASKVGSRKGGIEFLLACGF----ERSIAPAPLL--NTGSGDEQLVLKDDHQSR-LLAARRILTMRAVQELGMKAEELPEY-REPPVVNLTGGAPS-AAEFNPYVGHRFDAQSLAVGVDLGPDPNYISKTDSELQKLLEKQAKLEA 199          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A397D135_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D135_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.610e-13
Identity = 66/185 (35.68%), Postives = 93/185 (50.27%), Query Frame = 0
Query:    6 FDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVAG-GIPERN 189
            FDA S+  V+TL +IV N++ +PDE + R +R +N  FH  VG+ +GG+ FL+ +GF  ++ +            GS     VLP D  D ALL+    LL   A       D +  PP  RP+      A+SP   FD YK  I+     P+G    S+TE RL+ L  K   ++A   IP RN
Sbjct:  238 FDAVSTDVVLTLMKIVCNILSKPDEPKVRSIRVANPKFHDAVGKHQGGVMFLQSLGFQQQTNE----------GEGSSPSHFVLPEDA-DTALLRRGLALLQDQA-------DDLRLPPTSRPS--VVVQAASP-VEFDAYKAVITRVQAQPRG---LSVTEMRLEDLKRKEEELLAMIHIPARN 398          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: A0A397C114_9STRA (UBX domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C114_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.040e-13
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 0
Query:    6 FDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFISSTTPTPKGQEEQSLTEKRLQALLEKRASVVAG-GIPERN 189
            FDA S+  V+TL +IV N++ +PDE + R +R +N  FH  VG+ +GG+ FL+ +GF   + +            GS     VLP D  D ALL+    LL   A       D +  PP  RP+      A+SP   FD YK  I+     P+G    S+TE RL+ L  K   ++A   IP RN
Sbjct:  238 FDAVSTDVVLTLMKIVCNILSKPDEPKVRSIRAANPKFHDAVGKHQGGVMFLQSLGFQQLTNE----------GEGSSPSHFVLPEDA-DSALLRRGLALLQDQA-------DDLRLPPTSRPS--VVVQAASP-VEFDAYKAVITRVQAQPRG---LSVTEMRLEDLKRKEEELLAMIHIPARN 398          
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Match: K0SQI5_THAOC (UBX domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQI5_THAOC)

HSP 1 Score: 79.0 bits (193), Expect = 1.140e-12
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 0
Query:    5 HFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRIRGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLKEARVLLDKHAVI-LGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYK 147
            +FD+ +  C+VTL RI+DN++ +P+E + R +RC+N AF +KVG+ +GG EFL  IGF+ +        Y+    SG+   ML L ++ E + +L   R  L + AV  L +  D +P+ P+   TP  A   + P A+  P K
Sbjct:  240 NFDSSTKDCLVTLLRIIDNLLSKPNEPKVRSIRCANIAFDKKVGQCKGGYEFLYSIGFLPR--------YAALGGSGNIPEMLELKAENESREILLRGRQTLVQSAVRDLQLSSDDLPKFPKTN-TP--ASTLAQPPASIRPSK 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19542.5447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT67_ECTSI5.520e-10558.59PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LNR6_9PHAE3.470e-7841.19UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A662X4H9_9STRA9.980e-2030.83PUB domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A8J5JF70_9STRA1.780e-1729.29Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
G4YTH0_PHYSP4.340e-1626.33UBX domain-containing protein n=1 Tax=Phytophthora... [more]
A0A5D6XXN3_9STRA6.760e-1529.79UBX domain-containing protein n=1 Tax=Pythium bras... [more]
A0A1Z5KM45_FISSO3.090e-1434.95UBX domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A397D135_9STRA1.610e-1335.68Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397C114_9STRA3.040e-1335.68UBX domain-containing protein n=11 Tax=Aphanomyces... [more]
K0SQI5_THAOC1.140e-1236.11UBX domain-containing protein (Fragment) n=1 Tax=T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 12..73
e-value: 5.2E-8
score: 42.6
IPR018997PUB domainPFAMPF09409PUBcoord: 12..92
e-value: 8.2E-15
score: 54.5
NoneNo IPR availableGENE3D1.20.58.2190coord: 4..108
e-value: 8.8E-16
score: 59.3
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 10..118
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 12..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19542contigH-elongata_contig19542:964..6454 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19542.5447.1mRNA_H-elongata_contig19542.5447.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19542 964..6478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19542.5447.1 ID=prot_H-elongata_contig19542.5447.1|Name=mRNA_H-elongata_contig19542.5447.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp
MAAGHFDADSSACVVTLARIVDNVVHRPDEARTRQLRCSNSAFHQKVGRI
RGGIEFLEGIGFVSKSEDLVASAYSIGSTSGSGGRMLVLPSDREDQALLK
EARVLLDKHAVILGVPRDKMPQPPRQRPTPGGAGAASSPEATFDPYKPFI
SSTTPTPKGQEEQSLTEKRLQALLEKRASVVAGGIPERNIQFQLYVSPPR
TVLKETSSLSEAGLVPAALVYVSWKNVPPPGEAEGAYLKVELVCVGGSSS
SVARPVGVSLEEGGEGGGAEASKLQAGTRASMGAKKTRSGGGSKKPGWLK
IN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf