prot_H-elongata_contig195266.5443.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig195266.5443.1
Unique Nameprot_H-elongata_contig195266.5443.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig195266.5443.1 vs. uniprot
Match: D8LQT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQT6_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.080e-22
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0 
Query:    1 SDLPTPIDERVKLREIPERLYVVRQFSGNMGTGDGHDASAELERANTEKGVNADGGALGEYVGEDAKYLVAR 72
            SDLPTP D RV LRE+PE +Y+V QFSGNMG GDGHDA AE ER    + V ++GGA  EYV  D+K+LVAR
Sbjct:  123 SDLPTPTDSRVSLREVPEAVYLVHQFSGNMGRGDGHDAIAERERIVAVEKVASEGGAFSEYVSADSKFLVAR 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig195266.5443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQT6_ECTSI1.080e-2263.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 2..56
e-value: 6.8E-7
score: 29.6
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 1..69
e-value: 2.9E-6
score: 29.0
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig195266contigH-elongata_contig195266:76..291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig195266.5443.1mRNA_H-elongata_contig195266.5443.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig195266 76..291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig195266.5443.1 ID=prot_H-elongata_contig195266.5443.1|Name=mRNA_H-elongata_contig195266.5443.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
SDLPTPIDERVKLREIPERLYVVRQFSGNMGTGDGHDASAELERANTEKG
VNADGGALGEYVGEDAKYLVAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006917SOUL_haem-bd
IPR011256Reg_factor_effector_dom_sf