prot_H-elongata_contig19425.5397.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19425.5397.1
Unique Nameprot_H-elongata_contig19425.5397.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length450
Homology
BLAST of mRNA_H-elongata_contig19425.5397.1 vs. uniprot
Match: D7FT50_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT50_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 3.830e-119
Identity = 222/386 (57.51%), Postives = 264/386 (68.39%), Query Frame = 0
Query:   82 QGRAKRKTA---LGGYFSESHMSSKARGDEISKRSTAVAEAARKVAFIRANSFKGARPGYMFQKGASGLGYYFDKV----FSAREAREEMQRRAGEGEEESRSAARWEDAPGKVAAAKVGVARRPSVDVLAAGHKLEALLLKPKKAAKAASLMADLMDAEMRPENAAMFFRALRPLAEEPAGDAALASGEGAARAFCLLVDRGADWLSNPSDRVRVVTWGLLFGLRHDVKTDDSFQFARAVKRLREAIEALGDAAGGGDASD-----------TISGGGEKMCAADEAASLPLERKRAIVLIMQETFKSYHLAWARSSIEPAFKAASDRRRLFPEGDLREALDGFTETITKRQRNPSGALAPPSRSVRALNSTAHPTLNKRSDVIR 449
            Q +A++ TA    GGYF  +          ++   ++VAEA+R+  F  A+SF GAR GY+FQKG  GLGYY D+V     +A +A     R    G E   S  R E    +         +  +VDV A+  KL+  +LKPKKAAKAASLMADLM+A +RPENA MFFRAL+PLAEEPAG+AALA+GEG ARAF  L  R ++W+  PS+ VR VTW LLFGLRHD KTDDSF FARA+KRLREAIEALG   GGG A+D           T S GG ++       SL LERK A++L+M+E FKSYHLAWARSSIEPAFKAA+DRRRLFPEGDLR+ LD FT+ ITKRQRNP G +APPSRSVRA NSTAHP LNKRSDVIR
Sbjct:  124 QKKAQKTTADGTTGGYFKGT--------TSLTSAQSSVAEASRQP-FRAADSFSGARKGYVFQKGPLGLGYYADRVQIRAAAAADAVVAASRAKSRGPEARGSGGRPETEGREK--------KTQTVDVAASLQKLKVFILKPKKAAKAASLMADLMEAHLRPENARMFFRALKPLAEEPAGEAALAAGEGGARAFRKLAQRASEWVGAPSEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGGVTGGGKATDGTXXXXXXXXXTGSAGGNRV-------SLSLERKTALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGDLRDTLDDFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 485          
BLAST of mRNA_H-elongata_contig19425.5397.1 vs. uniprot
Match: A0A7S3XWU9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWU9_HETAK)

HSP 1 Score: 55.5 bits (132), Expect = 1.530e-5
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0
Query:  200 SVDVLAAGHKLEALLLKPKKAAKAASLMADLMDAEMRPENAAMFFRAL-RPLAEEPAGDAALASGEGA-ARAFCLLVDRGADWLSNPSDRVRVVTWGLLFGLRHDVKTDDSFQFARAVKRLREAIEAL 325
            SVDV  A  K++  L K KK  KA+ L+  LM A +  E A +FF  +     + P  D  L  G  A ARA    + R  D       +  + T  L   +  D++TDD++QF+RA K LREA+ A+
Sbjct:   26 SVDVAQALQKIKPHLSKEKKFEKASGLLYQLMQAHLSEETADLFFDTIYESTLQAPGQDFYLRGGVRAPARALFDKLLRERDLFFLERQQYELETLRLRVAVAGDLRTDDTYQFSRAAKHLREALLAM 153          
BLAST of mRNA_H-elongata_contig19425.5397.1 vs. uniprot
Match: A0A7S2HDH6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDH6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.240e-5
Identity = 43/139 (30.94%), Postives = 64/139 (46.04%), Query Frame = 0
Query:  305 TDDSFQFARAVKRLREAIEALGDAAGGGDASDTISGGGEKMCAADEAASLPLERKRAIVLIMQETFKSYHLAWARSSIEPAFKAASDRRRLFPEGDLREALDGFTETITKRQRNPSGALAPPSRSVRALNSTAHPTLNK 443
            +DD++ FARA+KR+R A+E + D  G  +      GGG   C            +R I+  ++ +       WA+  IE     A++ R  F EG  R  LD  TE +   QR         +R+VR ++S  HP  NK
Sbjct:   65 SDDTYTFARAMKRVRGAVEGVADKYGKDE------GGG---C-----------YRRLILACLETSLVKRSQLWAKPEIERTMTLAAENRLHFSEGAERNHLDSLTEKMRHGQRK-----VIVNRTVRVVDSITHPLRNK 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19425.5397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT50_ECTSI3.830e-11957.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XWU9_HETAK1.530e-535.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2HDH6_9STRA4.240e-530.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36749FAMILY NOT NAMEDcoord: 159..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19425contigH-elongata_contig19425:748..3424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19425.5397.1mRNA_H-elongata_contig19425.5397.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19425 748..3424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19425.5397.1 ID=prot_H-elongata_contig19425.5397.1|Name=mRNA_H-elongata_contig19425.5397.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=450bp
ETKDQDTADADDGDPFGLGKIMANDKQKAPISDRYRVERRNEEEEEEEDP
FGLGRIMAGDHKAEDSTGRESSRPSATVPTGQGRAKRKTALGGYFSESHM
SSKARGDEISKRSTAVAEAARKVAFIRANSFKGARPGYMFQKGASGLGYY
FDKVFSAREAREEMQRRAGEGEEESRSAARWEDAPGKVAAAKVGVARRPS
VDVLAAGHKLEALLLKPKKAAKAASLMADLMDAEMRPENAAMFFRALRPL
AEEPAGDAALASGEGAARAFCLLVDRGADWLSNPSDRVRVVTWGLLFGLR
HDVKTDDSFQFARAVKRLREAIEALGDAAGGGDASDTISGGGEKMCAADE
AASLPLERKRAIVLIMQETFKSYHLAWARSSIEPAFKAASDRRRLFPEGD
LREALDGFTETITKRQRNPSGALAPPSRSVRALNSTAHPTLNKRSDVIR*
back to top