prot_H-elongata_contig19364.5375.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19364.5375.1
Unique Nameprot_H-elongata_contig19364.5375.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length478
Homology
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: D7G3X8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3X8_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 3.190e-132
Identity = 247/431 (57.31%), Postives = 278/431 (64.50%), Query Frame = 0
Query:   50 MQQATELNCSIREMHLFLLEHFLDYVDLYESLPSKRSLMTEGEKDMIDLEVTSFMTACAAGVDALKALLQRERLRRIEQEVVAARAVEEDGEGREDGLFGG-GAGADLLPGSRPAHEHTAVTFLFERLRVVTEVAETMQSERHQRTAAKKSRFYGGPAVSRREAANGGNDGDAKVHSA--AAKGAWWKPTVEELEEERLLQEMLPGVYGQAPGREAPVNPDDSQKGDALPTTQSSTLGTVWRRESSGISPTVDAGGRAAATVAATNDEGRERRPVHEDPPRRAPGGPGVVAGIPGPMRRWGGRGRTTVSSALAAVADEE-TVNDGLVPSAVLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 476
            MQQATELN SIREMH FL +HFLDYVD++  LPSKRSLM++ EKD+IDLEVTSFMTACAAGVDALKALLQRERLRR+EQE  AARA   DG G      GG GAG +L PGSRPAHE+ AVTFLFERL+ VTEVAE MQ+ERH R AA +SRFYGGPA S    A+GG   +A  H    AA  A W  T EELEEERLL+E LP  YG +      + P        L    ++  G   R ++    P + A    AA VA T   G                                                   + + G+V +AVLEGENRDLVARLKNELD+AR VETKM+EIS LMGLFASKVVEQQGGMEHVFDAAV  ND LVRGG+HLEKAV+RG  FRLFYAWFM+ ASFCLLFLHFFN
Sbjct:    1 MQQATELNYSIREMHTFLRQHFLDYVDVHHCLPSKRSLMSDEEKDLIDLEVTSFMTACAAGVDALKALLQRERLRRMEQEAAAARAEGADGRGSSLLDEGGVGAGGELRPGSRPAHENAAVTFLFERLKAVTEVAEAMQTERHARAAAGQSRFYGGPADS--SGASGGAGDEASRHGGPLAAASAVWGATPEELEEERLLRESLPAAYGDSSPSPPALTPAAEDLAGGLAGFATTAAGVPERSQT----PPLAADAADAAAVAETATAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSADGGVVSAAVLEGENRDLVARLKNELDDARLVETKMSEISGLMGLFASKVVEQQGGMEHVFDAAVSANDKLVRGGQHLEKAVQRGGGFRLFYAWFMMIASFCLLFLHFFN 425          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A7S3Y6Y2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Y2_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 6.890e-15
Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 0
Query:  376 VLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLH 473
            VL+ EN +L+A L+NELD  +Q+E+KM EIS+LM LF++KV+EQQ  +E +   A   + N+ +G K+++KA E    FR  Y  F++  SF LLFLH
Sbjct:  230 VLQEENHNLLADLQNELDSVKQIESKMAEISTLMSLFSTKVMEQQTEIEQLGTLAQKASTNIEQGNKYIDKASEIQGGFRKIYVTFIMTLSFILLFLH 327          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A662YRQ7_ACIRT (Syntaxin-18 n=4 Tax=Acipenseroidei TaxID=186622 RepID=A0A662YRQ7_ACIRT)

HSP 1 Score: 75.1 bits (183), Expect = 2.890e-11
Identity = 41/128 (32.03%), Postives = 74/128 (57.81%), Query Frame = 0
Query:  352 TTVSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            T V      + ++  V D L P  +   E EN+ LV  + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++++ +  V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++ +
Sbjct:  178 TDVQDTSFGLWEDGKVEDELSPEEIQMFEQENQRLVGEMNNLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHELVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYGS 305          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A834FF02_ORYME (Syntaxin-18 n=2 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834FF02_ORYME)

HSP 1 Score: 73.6 bits (179), Expect = 4.020e-11
Identity = 40/126 (31.75%), Postives = 76/126 (60.32%), Query Frame = 0
Query:  354 VSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            V  +  ++ +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  115 VQGSSVSLWEEGRVEDELSPEEIQMFEQENQRLVSEMSSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNLHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 240          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A4W4GYJ2_ELEEL (Syntaxin-18 n=3 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GYJ2_ELEEL)

HSP 1 Score: 74.7 bits (182), Expect = 4.450e-11
Identity = 42/127 (33.07%), Postives = 75/127 (59.06%), Query Frame = 0
Query:  353 TVSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            TVS     + ++  V D L P  +   E EN+ LV  + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++H+    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  192 TVSVGGVDLWEDNKVEDELSPEEIQMFEQENQRLVNEMDSLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDHIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 318          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A2I4BBN6_9TELE (Syntaxin-18 n=3 Tax=Rivulidae TaxID=28771 RepID=A0A2I4BBN6_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 4.670e-11
Identity = 39/117 (33.33%), Postives = 73/117 (62.39%), Query Frame = 0
Query:  363 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++ +  V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  207 EEGRVEDELSPEEIQMFEQENKRLVSEMNSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHELVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 323          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: UPI001F08520E (syntaxin-18 isoform X2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F08520E)

HSP 1 Score: 74.3 bits (181), Expect = 5.060e-11
Identity = 40/117 (34.19%), Postives = 71/117 (60.68%), Query Frame = 0
Query:  363 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            +E  V D L P  +   E EN+ LV+ + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++ +    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  186 EEGRVEDELSPEEIQMFEHENQRLVSEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIQNNAGFRVWILFFLVMCSFSLLFLDWYDS 302          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: H2MQE0_ORYLA (Syntaxin-18 n=6 Tax=Oryzias TaxID=8089 RepID=H2MQE0_ORYLA)

HSP 1 Score: 74.7 bits (182), Expect = 5.260e-11
Identity = 40/126 (31.75%), Postives = 76/126 (60.32%), Query Frame = 0
Query:  354 VSSALAAVADEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFNT 477
            V  +  ++ +E  V D L P  +   E EN+ LV+ + + +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL ++++
Sbjct:  211 VQGSAVSLWEEGRVEDELSPEEIQMFEQENQRLVSEMSSLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 336          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: A0A087XLM6_POEFO (Syntaxin-18 n=13 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A087XLM6_POEFO)

HSP 1 Score: 74.7 bits (182), Expect = 5.350e-11
Identity = 40/116 (34.48%), Postives = 71/116 (61.21%), Query Frame = 0
Query:  363 DEETVNDGLVPSAV--LEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 476
            +E  V D L P  +   E EN+ LV+ + N +DE RQ+E K+ EIS L  +FA KV++Q+  ++++    V   +N+  G + + +A++  A FR++  +F++  SF LLFL +++
Sbjct:  222 EEGRVEDELSPEEIQMFEQENQKLVSEMNNLVDEVRQIEGKVVEISRLQEIFAEKVLQQETDIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYD 337          
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Match: UPI000C6D6EF1 (syntaxin-18-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D6EF1)

HSP 1 Score: 74.3 bits (181), Expect = 5.460e-11
Identity = 38/101 (37.62%), Postives = 63/101 (62.38%), Query Frame = 0
Query:  376 VLEGENRDLVARLKNELDEARQVETKMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVERGAAFRLFYAWFMLGASFCLLFLHFFN 476
            + E ENR L   +   +DE RQ+E K+ EIS L  +FA KV++Q+  +  + D  V T +N+  G + L +A+++ A FR++  +F++  SF LLFL ++N
Sbjct:  208 IFEQENRRLYEEMNTLVDEVRQIEGKVVEISRLQEIFAEKVLQQEQDINRISDTIVGTTENIKEGNEELREAMKKNAGFRVWILFFLIVISFSLLFLDWYN 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19364.5375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3X8_ECTSI3.190e-13257.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y6Y2_HETAK6.890e-1546.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A662YRQ7_ACIRT2.890e-1132.03Syntaxin-18 n=4 Tax=Acipenseroidei TaxID=186622 Re... [more]
A0A834FF02_ORYME4.020e-1131.75Syntaxin-18 n=2 Tax=Oryzias melastigma TaxID=30732... [more]
A0A4W4GYJ2_ELEEL4.450e-1133.07Syntaxin-18 n=3 Tax=Electrophorus electricus TaxID... [more]
A0A2I4BBN6_9TELE4.670e-1133.33Syntaxin-18 n=3 Tax=Rivulidae TaxID=28771 RepID=A0... [more]
UPI001F08520E5.060e-1134.19syntaxin-18 isoform X2 n=1 Tax=Hypomesus transpaci... [more]
H2MQE0_ORYLA5.260e-1131.75Syntaxin-18 n=6 Tax=Oryzias TaxID=8089 RepID=H2MQE... [more]
A0A087XLM6_POEFO5.350e-1134.48Syntaxin-18 n=13 Tax=Cyprinodontoidei TaxID=8087 R... [more]
UPI000C6D6EF15.460e-1137.62syntaxin-18-like n=1 Tax=Centruroides sculpturatus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 381..405
NoneNo IPR availablePANTHERPTHR15959SYNTAXIN-18coord: 1..476
NoneNo IPR availablePANTHERPTHR15959:SF0SYNTAXIN-18coord: 1..476
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..455
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 476..477
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 456..475
NoneNo IPR availableTMHMMTMhelixcoord: 456..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19364contigH-elongata_contig19364:547..5250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19364.5375.1mRNA_H-elongata_contig19364.5375.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19364 430..6181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19364.5375.1 ID=prot_H-elongata_contig19364.5375.1|Name=mRNA_H-elongata_contig19364.5375.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=478bp
MDLTKEWFVEVRRLRKQSGLSVGEGRGLSATAAAEAAGGSRWRAPLTPFM
QQATELNCSIREMHLFLLEHFLDYVDLYESLPSKRSLMTEGEKDMIDLEV
TSFMTACAAGVDALKALLQRERLRRIEQEVVAARAVEEDGEGREDGLFGG
GAGADLLPGSRPAHEHTAVTFLFERLRVVTEVAETMQSERHQRTAAKKSR
FYGGPAVSRREAANGGNDGDAKVHSAAAKGAWWKPTVEELEEERLLQEML
PGVYGQAPGREAPVNPDDSQKGDALPTTQSSTLGTVWRRESSGISPTVDA
GGRAAATVAATNDEGRERRPVHEDPPRRAPGGPGVVAGIPGPMRRWGGRG
RTTVSSALAAVADEETVNDGLVPSAVLEGENRDLVARLKNELDEARQVET
KMTEISSLMGLFASKVVEQQGGMEHVFDAAVLTNDNLVRGGKHLEKAVER
GAAFRLFYAWFMLGASFCLLFLHFFNT*
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