prot_H-elongata_contig19358.5372.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19358.5372.1
Unique Nameprot_H-elongata_contig19358.5372.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig19358.5372.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 9.270e-29
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    1 MKVSQDMQLSWLEQWHSMDLDGSNL-DYPAFIGGCGLDDNMWSRRIFNLLDQNSSGIVMAFRMCSRRGITCELENAVLDEKDIRLFVEDR 89
            M VS DM+LSWL++W SMD DGSNL DYP F+  C L DNMWS R+FNLLD+N   + +AFRMCSRRG T + + +VLDEKDIRLFVE+R
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNF--VEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEER 88
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BLAST of mRNA_H-elongata_contig19358.5372.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.940e-16
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:    1 MKVSQDMQLSWLEQWHSMDLDGSNL-DYPAFIGGCGLDDNMWSRRIFNLLDQNSSGIVMAF 60
            MKVS DM+LSWL++W SMD DGSNL DY  F+  CGL DN+WS R+FNLLD+N  G++ A+
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAY 61
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19358.5372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLD7_ECTSI9.270e-2965.56EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JXQ3_9PHAE2.940e-1662.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19358contigH-elongata_contig19358:474..1033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19358.5372.1mRNA_H-elongata_contig19358.5372.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19358 474..1033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19358.5372.1 ID=prot_H-elongata_contig19358.5372.1|Name=mRNA_H-elongata_contig19358.5372.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MKVSQDMQLSWLEQWHSMDLDGSNLDYPAFIGGCGLDDNMWSRRIFNLLD
QNSSGIVMAFRMCSRRGITCELENAVLDEKDIRLFVEDRF
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