prot_H-elongata_contig193387.5364.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193387.5364.1
Unique Nameprot_H-elongata_contig193387.5364.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
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BLAST of mRNA_H-elongata_contig193387.5364.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.370e-8
Identity = 23/31 (74.19%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:    5 LCRCYWEAGDDLRADRKYCFNTLLKAAKFDP 35
            L RCYWE G   R DRKYCFN+LLKAAK DP
Sbjct:  531 LARCYWEVGGLYREDRKYCFNSLLKAAKLDP 561
[Close]
BLAST of mRNA_H-elongata_contig193387.5364.1 vs. uniprot
Match: A0A6H5JAD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD5_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 6.400e-8
Identity = 23/31 (74.19%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:    5 LCRCYWEAGDDLRADRKYCFNTLLKAAKFDP 35
            L RCYWE G   R DRKYCFN+LLKAAK DP
Sbjct:  706 LARCYWEVGGLYREDRKYCFNSLLKAAKLDP 736
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193387.5364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G059_ECTSI6.370e-874.19Similar to Tetratricopeptide repeat protein 37 (TP... [more]
A0A6H5JAD5_9PHAE6.400e-874.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193387contigH-elongata_contig193387:746..850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193387.5364.1mRNA_H-elongata_contig193387.5364.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193387 746..850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193387.5364.1 ID=prot_H-elongata_contig193387.5364.1|Name=mRNA_H-elongata_contig193387.5364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
MSGWLCRCYWEAGDDLRADRKYCFNTLLKAAKFDP
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