prot_H-elongata_contig19334.5363.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19334.5363.1
Unique Nameprot_H-elongata_contig19334.5363.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length265
Homology
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: D8LBD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD6_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 4.760e-103
Identity = 199/220 (90.45%), Postives = 210/220 (95.45%), Query Frame = 0
Query:   45 AHAGTRKKTFKGHTGVVNSCCVSRTGNLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEIGA 264
            A+AG RKKTFKGH+GVVNSC +SRTGNL+AS SDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDN+IKVFDVRKLD+AY+M GHTDT XXXXXXXXXXXXXXXXXXXXXXXXXXXPFAN+ R+EKTF G+KHGGEKNLLKCAW XXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNE+ FHP ESIIGSCGSDKNIYLGEIGA
Sbjct:  131 ANAGKRKKTFKGHSGVVNSCSISRTGNLMASASDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNEIKVFDVRKLDIAYTMTGHTDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANQNRLEKTFHGIKHGGEKNLLKCAWXXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEMTFHPTESIIGSCGSDKNIYLGEIGA 350          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A6H5JPD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD3_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 6.930e-90
Identity = 164/209 (78.47%), Postives = 174/209 (83.25%), Query Frame = 0
Query:   64 CCVSRTGNLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVK--------HGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEIGA 264
            C +SRTGNL+AS SDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDN+IKVFDVRKLD+AY+M GHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXX PF N+ R+EKTF G+K        HGGEKNLLKCAWS                  DEPSTQELYFLPGHTGSVNE+ FHP ESIIGSCGSDKNIY+GEIGA
Sbjct:    3 CSISRTGNLVASASDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNEIKVFDVRKLDIAYTMTGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXRPFVNQNRLEKTFHGIKDVYDPFLQHGGEKNLLKCAWSPDGEMVSAGSSDQAVHIWDEPSTQELYFLPGHTGSVNEMTFHPTESIIGSCGSDKNIYIGEIGA 211          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: S2JES3_MUCC1 (Uncharacterized protein n=6 Tax=Mucoraceae TaxID=34489 RepID=S2JES3_MUCC1)

HSP 1 Score: 210 bits (534), Expect = 9.010e-63
Identity = 123/248 (49.60%), Postives = 157/248 (63.31%), Query Frame = 0
Query:   16 SQAILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            + A++E+HWS +S  I +CSADKT+G +D   GTR + ++GHTG+VNSC V+R G  L+ SGSDD  VK+WD R + +V  F N+YQVT+VC S     + S G+DNDIKV+DVRK  LAY+M+GH DTV           XXXXXXXXXXXXXXX PFA   R  K F G  HG EKNL+K  W+                  D  + + LY LPGH G VN+V +HP E II S  +DK ++LGE+
Sbjct:  109 TNAVMEIHWSRDSNQIFSCSADKTVGIFDVKTGTRSRRWRGHTGIVNSCQVARRGAELVVSGSDDCTVKIWDSRAKEAVNTFENEYQVTSVCFSDAGDMIYSAGLDNDIKVWDVRKNQLAYTMKGHMDTVSGMSLSPDGNNXXXXXXXXXXXXXXXKPFAAADRCLKIFEGAPHGFEKNLIKPCWATDGSQIACGSADRSVVIWDVDTRKILYKLPGHKGCVNDVDWHPKEPIIMSASTDKTLFLGEV 356          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A068SGF1_9FUNG (U5 small nuclear ribonucleoprotein 40 kdaprotein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068SGF1_9FUNG)

HSP 1 Score: 200 bits (509), Expect = 5.130e-59
Identity = 151/266 (56.77%), Postives = 184/266 (69.17%), Query Frame = 0
Query:    1 LLW--YCVCNRRAGMH-QSQAILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            LLW  Y  CN    +   + AILE+HWS +   + +CSADKT+  WDA  G R + +KGHT VVNSC V+R G   + SGSDDG +KLWD R + +V  F ++YQVT+VC S     V +GG+DN+IKV+D+RK  +AY++ GH DT+  XXXXXXXXXXXXXXXXXXXXXXXXXPFA   R  K   G  HG EKNL+   WS  XXXXXXXXXXXXXXXX+  S + LY LPGH G VN+V +HP E II S  +DK I LGE+
Sbjct:   94 LLWNTYGDCNNYGVLRGHANAILEVHWSRDGSQLFSCSADKTVAIWDATTGERVRRWKGHTLVVNSCQVARRGPETVVSGSDDGCIKLWDSRSKDAVQNFQDKYQVTSVCFSDAGDMVYTGGLDNEIKVWDIRKKAVAYTLSGHLDTITGXXXXXXXXXXXXXXXXXXXXXXXXXPFAPADRCTKVLEGAPHGFEKNLITPCWSTDXXXXXXXXXXXXXXXXEANSGKILYKLPGHKGCVNDVDWHPMEPIIMSASTDKTIMLGEV 359          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A0A9B0W5_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9B0W5_ARUDO)

HSP 1 Score: 195 bits (496), Expect = 2.110e-58
Identity = 122/246 (49.59%), Postives = 152/246 (61.79%), Query Frame = 0
Query:   18 AILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTGN-LLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            AIL+L W+ +   II+ S DKTL  WD   G + K    H+  VNSCC +R    L+ SGSDDG  KLWD R R ++    +++Q+TAV  S    +V +GG+DND+K +D+RK ++   ++GH D +        XXXXXXXXXXXXXXXXXXXP+A E R  KT  G +H  EKNLLKC+WS                  D  S + LY LPGH GSVNE AFHP E IIGSCGSDK IYLGE+
Sbjct:    9 AILDLQWTTDGTQIISASPDKTLRVWDVETGKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDKFQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDXXXXXXXXXXXXXXXXXXXPYAPENRNIKTLIGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWDTTSRRILYKLPGHNGSVNETAFHPTEPIIGSCGSDKQIYLGEL 254          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A504YCM9_FASGI (U5 small nuclear ribonucleoprotein 40 kDa n=2 Tax=Fasciola TaxID=6191 RepID=A0A504YCM9_FASGI)

HSP 1 Score: 197 bits (500), Expect = 1.170e-57
Identity = 123/246 (50.00%), Postives = 149/246 (60.57%), Query Frame = 0
Query:   18 AILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            AIL+L  S +   I T SADK++G WD +   R K F+GH  VVNSC ++R G  L+ SGSDDG VKLWD R +  V  F N YQV +V  +   + + SGGIDN IK +D+RKLD++  + GHTDTV            XXXXXXXXXXXXXX PFA   R  K F G +H  EKN+L+CAWS                  D  + Q +Y LPGHT SVNE AFHP E I+ S GSDK I+LGEI
Sbjct:  114 AILDLILSADDAVIYTASADKSVGLWDTNLAKRIKRFRGHQNVVNSCGLARRGPQLVCSGSDDGTVKLWDRRQKTHVQSFQNTYQVLSVTFNDTAEMIFSGGIDNVIKGWDIRKLDVSMLLTGHTDTVTGLSVSPDGSFLXXXXXXXXXXXXXXRPFAPPERCMKVFVGHQHTFEKNMLRCAWSADGRRITCGSGDRYVHVWDVSTRQLVYKLPGHTASVNETAFHPCEPILLSVGSDKKIFLGEI 359          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A6U6E5C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6E5C0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.730e-57
Identity = 104/250 (41.60%), Postives = 133/250 (53.20%), Query Frame = 0
Query:   18 AILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-----NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            A+L++ WS +S  ++T SADK L +WD   G R K F GH GVVN+  V R G      L+AS SDD   +LWD R R  V +  + YQVTAV  S D + V +GGIDN I  +D+R+ +   +M+GHTDT+                           PFA   R  KTF G  H  E+ LL CAWS                  DE ST+ELY+LPGH G VN V FHP E++I S  SDK +Y+GE+
Sbjct:   91 AVLDVAWSHDSERVVTASADKHLAWWDVSRGERVKRFVGHEGVVNAVDVVREGAGSFPGLVASASDDCTARLWDARRRGDVGQLEHGYQVTAVAYSSDGKTVYTGGIDNCIHAWDIRRKERIMTMKGHTDTITCLSLSPKGTHLLSNSSDGTLRTWDIRPFAEGKRHRKTFEGGTHNAERGLLNCAWSADGTMVTGGSADRVVHIWDEYSTEELYYLPGHAGCVNSVVFHPKENVIASGSSDKTLYVGEL 340          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A0C9SDU0_AMBAM (Putative u5 snrnp-specific protein-like factor (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9SDU0_AMBAM)

HSP 1 Score: 192 bits (489), Expect = 4.880e-57
Identity = 128/246 (52.03%), Postives = 154/246 (62.60%), Query Frame = 0
Query:   18 AILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            A+L++H+S +   + T S DKTLG WD H G R K  +GHT  VN+C  +R G  L+ SGSDD  +KLWD R R     +   YQ+TAV  +   +QV+S GIDN IKV+D+RK  + Y M GH DT+  XXXXXXXXXXXXXXXXXXXXXXXXXPFA + R  K   G  H  EKNLL+CAWS                  D  S + L  LPGH GSVN+V FHP E I+ S  SDK +YLGEI
Sbjct:   31 AVLDMHFSTDGSLLFTASTDKTLGVWDTHVGVRIKRLRGHTLYVNACHPARRGPQLICSGSDDSTLKLWDTRKRTPAHSYQESYQITAVSFNDTAEQVLSAGIDNQIKVWDLRKNAVLYKMVGHLDTITGXXXXXXXXXXXXXXXXXXXXXXXXXPFAPQERCVKILQGHMHNFEKNLLRCAWSSDGSKVTAGSADRYVHIWDTTSRRLLCKLPGHNGSVNDVQFHPKEPIVLSVASDKQVYLGEI 276          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A0L0GAR9_9EUKA (U5 small nuclear ribonucleoprotein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAR9_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 8.500e-57
Identity = 124/247 (50.20%), Postives = 156/247 (63.16%), Query Frame = 0
Query:   16 SQAILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTGNLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            + A++++ ++     +++CSADK L  W+   G R K  +GHT VVNSCC SR G L  SGSDDG VKLWD R +++VA   N+YQVT VC S D Q++               K ++ Y M GHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXP+  + R+EK F G  H  EKNLLKC+W                   D  S + LY LPGHTG+VN+V FHP E ++ SC SDK ++LGE+
Sbjct:  113 TNAVMQVDFASGGGELLSCSADKFLALWNVSTGERIKKIRGHTAVVNSCCPSRVGTLACSGSDDGTVKLWDFREKKAVATLSNRYQVTGVCFSADAQRIYXXXXXXXXXXXXXXKNEVEYHMNGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPYKADNRLEKIFTGATHNFEKNLLKCSWDPSGKMVTAGSADRLVCVWDAKSAKMLYRLPGHTGTVNDVKFHPREPVVLSCSSDKKMFLGEL 359          
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Match: A0A183KND3_9TREM (WD_REPEATS_REGION domain-containing protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KND3_9TREM)

HSP 1 Score: 191 bits (485), Expect = 1.080e-56
Identity = 118/246 (47.97%), Postives = 146/246 (59.35%), Query Frame = 0
Query:   18 AILELHWSPNSPTIITCSADKTLGYWDAHAGTRKKTFKGHTGVVNSCCVSRTG-NLLASGSDDGFVKLWDPRVRRSVAEFMNQYQVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANEIRMEKTFFGVKHGGEKNLLKCAWSXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEVAFHPNESIIGSCGSDKNIYLGEI 262
            AIL+L  S +   I T S+DK++  WD  +  R K F+GH  +VNSC V+R G   + SGSDDG ++LWD R +  V  F N YQV +V  S   + + SGGIDN +K +D+RKL+ +  + GHTDTV            XXXXXXXXXXXXXX PFA   R  K F G +H  EKNLL+CAWS                  D  + Q +Y LPGHT SVNE AFHP E I+ S GSDK I+LGEI
Sbjct:    8 AILDLVLSSDDSVIYTASSDKSIALWDTESAQRIKKFRGHENIVNSCAVARRGPQHVCSGSDDGTIRLWDRRQKACVQTFQNTYQVLSVTFSDTTEMIFSGGIDNVVKGWDLRKLEASMLLNGHTDTVTGLSVSPDGSFLXXXXXXXXXXXXXXRPFAPTDRCTKIFTGHQHTFEKNLLRCAWSADNRRITSGSGDRYVHVWDVNTRQLVYKLPGHTASVNETAFHPTEPILLSVGSDKKIFLGEI 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19334.5363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD6_ECTSI4.760e-10390.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPD3_9PHAE6.930e-9078.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
S2JES3_MUCC19.010e-6349.60Uncharacterized protein n=6 Tax=Mucoraceae TaxID=3... [more]
A0A068SGF1_9FUNG5.130e-5956.77U5 small nuclear ribonucleoprotein 40 kdaprotein n... [more]
A0A0A9B0W5_ARUDO2.110e-5849.59Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A504YCM9_FASGI1.170e-5750.00U5 small nuclear ribonucleoprotein 40 kDa n=2 Tax=... [more]
A0A6U6E5C0_9STRA3.730e-5741.60Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A0C9SDU0_AMBAM4.880e-5752.03Putative u5 snrnp-specific protein-like factor (Fr... [more]
A0A0L0GAR9_9EUKA8.500e-5750.20U5 small nuclear ribonucleoprotein n=1 Tax=Sphaero... [more]
A0A183KND3_9TREM1.080e-5647.97WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 206..220
score: 27.94
coord: 73..87
score: 43.28
coord: 156..170
score: 34.8
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 130..169
e-value: 8.8E-8
score: 41.9
coord: 222..261
e-value: 1.2E-4
score: 31.4
coord: 2..44
e-value: 0.17
score: 21.0
coord: 89..127
e-value: 0.015
score: 24.5
coord: 47..86
e-value: 2.4E-11
score: 53.7
coord: 180..219
e-value: 0.0084
score: 25.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 51..86
e-value: 3.1E-9
score: 37.3
coord: 102..127
e-value: 0.2
score: 12.6
coord: 194..219
e-value: 5.8E-4
score: 20.6
coord: 136..169
e-value: 1.1E-5
score: 26.1
coord: 224..259
e-value: 0.0025
score: 18.6
coord: 14..44
e-value: 0.016
score: 16.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 187..228
score: 10.107
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 12..53
score: 9.807
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 229..264
score: 10.408
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 137..171
score: 15.588
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 54..95
score: 14.084
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..263
e-value: 7.1E-82
score: 276.5
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 14..262
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 14..262
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 12..264
score: 44.979
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 15..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19334contigH-elongata_contig19334:2803..5252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19334.5363.1mRNA_H-elongata_contig19334.5363.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19334 2803..5252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19334.5363.1 ID=prot_H-elongata_contig19334.5363.1|Name=mRNA_H-elongata_contig19334.5363.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
LLWYCVCNRRAGMHQSQAILELHWSPNSPTIITCSADKTLGYWDAHAGTR
KKTFKGHTGVVNSCCVSRTGNLLASGSDDGFVKLWDPRVRRSVAEFMNQY
QVTAVCLSRDDQQVMSGGIDNDIKVFDVRKLDLAYSMEGHTDTVTGLSLS
PDGNHLLSNSMDNSVIMWDVRPFANEIRMEKTFFGVKHGGEKNLLKCAWS
PDGEMVSAGSFDQAVHIWDEPSTQELYFLPGHTGSVNEVAFHPNESIIGS
CGSDKNIYLGEIGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf