prot_H-elongata_contig193307.5360.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193307.5360.1
Unique Nameprot_H-elongata_contig193307.5360.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
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BLAST of mRNA_H-elongata_contig193307.5360.1 vs. uniprot
Match: D8LUC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC9_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 4.240e-46
Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = 0 
Query:    1 EQLRNGQDLVDMRPNRLAKFDISGEVGYWKVERRAPPGAKRNLKLSLQNGFDVLVLDVPEQGDRKDLIVSYEIPVTRGRYHPSAIMFADEGNIYAARTKEELAGAAATTRKKIGTFKVDLATLPPIV 127
            +Q +NG D +  R N+LA+F+ SGEVGYWK+ RR  PGA +        G D LVLD+PEQG R++LIVSYEIP++ GRYHPS+IMFA +G IY A  KE+L G AA  RKKIG+F VDL TL P+V
Sbjct:   38 DQAKNGADFLTARENKLARFNNSGEVGYWKLVRRPIPGAPKRQSPLGNEGIDYLVLDIPEQGPRRNLIVSYEIPISNGRYHPSSIMFAQKGTIYVANAKEQLVGPAAAARKKIGSFSVDLPTLEPMV 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193307.5360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC9_ECTSI4.240e-4658.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193307contigH-elongata_contig193307:2..533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193307.5360.1mRNA_H-elongata_contig193307.5360.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193307 2..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193307.5360.1 ID=prot_H-elongata_contig193307.5360.1|Name=mRNA_H-elongata_contig193307.5360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
EQLRNGQDLVDMRPNRLAKFDISGEVGYWKVERRAPPGAKRNLKLSLQNG
FDVLVLDVPEQGDRKDLIVSYEIPVTRGRYHPSAIMFADEGNIYAARTKE
ELAGAAATTRKKIGTFKVDLATLPPIV
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