prot_H-elongata_contig19319.5354.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19319.5354.1
Unique Nameprot_H-elongata_contig19319.5354.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length300
Homology
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 1.690e-78
Identity = 119/153 (77.78%), Postives = 138/153 (90.20%), Query Frame = 0
Query:  147 ESTRDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGPS 299
            ES R++AL TVVYLLP+LDG+D G ++F   P LG+L+H +L PAL +W+NVPFMPLVMF+ILQVSVRRQDTSRF+RFNVQQAILVDILTVVLGLLGTA GY+ PEGEQF+TNFAFYCL GAVAYAV ETARG++ANQIPLISAAAE+Q+GPS
Sbjct:   12 ESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 164          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.680e-76
Identity = 119/153 (77.78%), Postives = 138/153 (90.20%), Query Frame = 0
Query:  147 ESTRDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGPS 299
            ES R++AL TVVYLLP+LDG+D G ++F   P LG+L+H +L PAL +W+NVPFMPLVMF+ILQVSVRRQDTSRF+RFNVQQAILVDILTVVLGLLGTA GY+ PEGEQF+TNFAFYCL GAVAYAV ETARG++ANQIPLISAAAE+Q+GPS
Sbjct:  153 ESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 305          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.040e-30
Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 0
Query:  152 KALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            + LA   Y+LP+LDG+  G N++   P +G  ++ +LGPAL +W  VPF+   +F+    + R  + SR VRF++QQAIL+DI  +VLGLL      + P G        FY L  AVAY++    +G+  N+IP+IS AA+ QIGP
Sbjct:   76 RLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGP 222          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S2CM34_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CM34_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 3.530e-26
Identity = 59/149 (39.60%), Postives = 95/149 (63.76%), Query Frame = 0
Query:  151 DKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFM-TNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            D+A++  VY+LPILDG  FG N++   P +G+  + +L P +  ++NVPF  L++F+ L    R++  SR+VRFN+QQA+L DI  ++  + G A G + P   Q M +NF +Y +   V Y+  + A+G+  + +P+IS AA +QIGP
Sbjct:   35 DRAVSAAVYILPILDGFVFGSNIYATFPLVGSAAYKLL-PLVNTFQNVPFAGLILFIGLSTFTRKEGLSRYVRFNIQQALLTDIALIIPTVFGGA-GRMFPLELQAMGSNFVWYAMVTIVCYSWVQIAQGKSPDGVPVISEAAAIQIGP 181          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT)

HSP 1 Score: 106 bits (265), Expect = 5.300e-24
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0
Query:  146 EESTRDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            E    ++ LAT+ Y+LP +DG  +G  +++  P +GA+      P +  +E++PF  LV F+ + +  R  + SRFVRFN+QQA+L+DI  +V GL G        E +   TNF FY     V YA+   A+G+  +Q+PL+S AA +QIGP
Sbjct:   69 EAPALERVLATLPYVLPAIDGFAYGLYVYQNVPPIGAIAGAAF-PFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGP 220          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S0I0B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0B2_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 1.700e-23
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 0
Query:  151 DKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIP-EGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            D+A A  VYL PI DGI FG+ LF   P  GAL   IL  A   ++++PF  L+ F+ L    R    SRF+RFN+QQAIL+DI  ++    G  VG ++P E +Q ++N  FY +  A+ Y+    A+G+  +Q+P++S AA   IGP
Sbjct:   81 DRAFAAAVYLFPITDGIFFGKFLFTSVPVFGALCLPIL-QASAAFDSIPFSGLIFFIGLSSMSRNPGLSRFLRFNLQQAILLDIAFIIPNFFG-GVGQMVPIEVQQVLSNTVFYSMVLAIGYSWFSIAQGKTPDQVPVVSEAANQAIGP 227          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S2AKC4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKC4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.290e-23
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 0
Query:  147 ESTRDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAV---GYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            E   D+  A + YLLP+LDG+ +G  +F++ P  GA   VILGP   +   +PF  L+ F+IL    R ++ +R VRF++QQAIL+DI  ++  L+G      G + P       NF FY L   ++Y+V     G+V N IP IS AAE  IGP
Sbjct:  193 EDIPDRVFACLPYLLPMLDGLQYGNGVFQMVPGAGATASVILGPFAAIRNAIPFGGLIFFLILSSLSRNENLNRGVRFSMQQAILIDIALILPSLVGGLASIGGEISPVITTPAENFVFYFLIATISYSVGSNLLGKVPNGIPFISEAAERSIGP 347          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 7.460e-23
Identity = 54/148 (36.49%), Postives = 87/148 (58.78%), Query Frame = 0
Query:  151 DKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            D+   T+ Y+LP+LDG  +G  +++  P  G +  VI  P + +++++PF  +V+F+ L +  R    SR VRFN+QQA+L+DI  ++ GL       L  E +   TNF FY     V Y+    A+G + +Q+P++S AA +QIGP
Sbjct:   45 DRVFGTLPYILPVLDGFGYGIYVYQNVPGAGEVAGVI-APLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLPLELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQVPVLSEAAMMQIGP 191          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S4N5C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5C0_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.610e-22
Identity = 58/151 (38.41%), Postives = 89/151 (58.94%), Query Frame = 0
Query:  150 RDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAV-GYLIPEGEQFM-TNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            +D+  + + YLLP+ DG  FG+ +F   P L A+  V + P     ++VPF+ L++F++L +  R  D +R VRFN QQAILVDI  +   L+G+ + G  +P       +NF +Y +   V Y+V    RG+  +QIP IS AAE+ +GP
Sbjct:   95 QDRIKSCIPYLLPLADGHHFGKYIFLNFPALRAVDEVTIAPLAHFLDSVPFLSLIVFLVLSLGTRNSDMARGVRFNAQQAILVDIALIFPELIGSGMDGVAMPTVLMASASNFVWYFMTACVGYSVVNNLRGKKPDQIPFISNAAEMAVGP 245          
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Match: A0A7S2K655_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K655_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.010e-22
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  150 RDKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPFMPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLIPEG-EQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGP 298
            ++K ++ + Y+LP++DG  FG  ++   P L  L  + LGP + + + VPF    +F++L +  R  + SR +RFNVQQAIL+DI  +   L+G+A+    P    +  TNF FY  A A  Y++     G+    IP+IS AAE  +GP
Sbjct:   16 QEKIISCLPYILPLMDGDKFGRYIYMRFPPLHVLEQIFLGPLVRIDQAVPFFGFGLFLVLALGGRNPELSRSIRFNVQQAILIDIALIFPELIGSAMSKSTPMYLVEPCTNFVFYAYAAACGYSIFSNLTGKTPKGIPIISEAAERAVGP 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19319.5354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C5_ECTSI1.690e-7877.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCJ5_9PHAE1.680e-7677.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUZ7_9STRA1.040e-3041.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CM34_9EUKA3.530e-2639.60Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S4ES88_CHRCT5.300e-2438.56Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0I0B2_9EUKA1.700e-2341.61Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2AKC4_9STRA2.290e-2340.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0PYH6_9EUKA7.460e-2336.49Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4N5C0_9STRA3.610e-2238.41Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2K655_9STRA4.010e-2236.67Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 153..292
e-value: 9.0E-12
score: 45.1
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 138..296
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 138..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..209
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 256..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19319contigH-elongata_contig19319:1765..4425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19319.5354.1mRNA_H-elongata_contig19319.5354.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19319 1470..5521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19319.5354.1 ID=prot_H-elongata_contig19319.5354.1|Name=mRNA_H-elongata_contig19319.5354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp
MGFSRISVATTTAVVAAVHLVGHSISSAEAFHIIPPGPRPGRHIRTMTAR
PSVMNHRHQTNIVSYRRPLCRTVAVGPVGGAEVLSIRCFHSSASASRPPP
SVTYRSCSTFSGGWSSASSVRRTERRGRRERPGGALFMVTSGGGKEESTR
DKALATVVYLLPILDGIDFGENLFRVCPQLGALLHVILGPALGVWENVPF
MPLVMFVILQVSVRRQDTSRFVRFNVQQAILVDILTVVLGLLGTAVGYLI
PEGEQFMTNFAFYCLAGAVAYAVTETARGRVANQIPLISAAAEVQIGPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20