prot_H-elongata_contig19317.5353.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19317.5353.1
Unique Nameprot_H-elongata_contig19317.5353.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length200
Homology
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BLAST of mRNA_H-elongata_contig19317.5353.1 vs. uniprot
Match: A0A6H5L563_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L563_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 5.260e-40
Identity = 94/213 (44.13%), Postives = 120/213 (56.34%), Query Frame = 0 
Query:    1 MLGACPFPERLDMPWFSSTLAGLGSRFHRPAVRAALFISKPATRTDAVLKAVEEGG------------VSAAVALDELRPVVDPDDGWCYAGLANQATLETVFLWIDRHGTYGNLFDSRHFMAMASTLVSAGRARGLVASCLANERRKEACAVCRMHYRAKAASTGENPEAAGIKGDG-------GEGGLRSVRQTDEFLKRFAEEFGVELLP 194
            +LGACPFPER+++ WF STLA LG RFH  AV+ AL +S PA RT AVL+ + + G            V+  V LDELRPV        + G ANQA LE VF+WID    +  L  +RHF  M STLV AGRARG+VA+ LA  +R+EA ++C+MHY A A       E               G GG      +   L+RFA+EF ++L P
Sbjct:  173 LLGACPFPERMNLKWFYSTLADLGPRFHAQAVQVALGVSGPAARTAAVLELLGQPGNGXXXXXXXXXXVALNVVLDELRPVAAGGGSGVWGGTANQAILEAVFVWIDERRGWAELRGTRHFHTMVSTLVRAGRARGMVAASLAAGKRQEAYSLCQMHYAAAAXXXVNGIEHGXXXXXXXXXXXXXGTGGW-----SRNSLERFAKEFDLKLPP 380
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BLAST of mRNA_H-elongata_contig19317.5353.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 2.090e-36
Identity = 89/208 (42.79%), Postives = 113/208 (54.33%), Query Frame = 0 
Query:    1 MLGACPFPERLDMPWFSSTLAGLGSRFHRPAVRAALFISKPATRTDAVLKAVEEGG------------VSAAVALDELRPVVDPDDGWCYAGLANQATLETVFLWIDRHGTYGNLFDSRHFMAMASTLVSAGRARGLVASCLANERRKEACAVCRMHYRAKAA--STGENPEAAGIKGDGGEGGLRSVRQTDEFLKRFAEEFGVELLP 194
            +LGACPFPER+++ WF STLA LG RFH  AV+ AL +  P  RT AVL  +E+ G            V+  V LDELRPV             NQ  LE +F+WID    +  L  +RHF AM STLV AGRARG+VA+ LA  +R+EA  +C+MHY   AA  +TG                      +   L+RFA+EFG+ L P
Sbjct: 2843 LLGACPFPERMNLKWFYSTLADLGPRFHAQAVQIALGVPGPVPRTAAVLDLLEQPGNGXXXXXXXXXXVALNVVLDELRPVAAXXXXXXXXXXXNQVILEAIFVWIDERRGWAELRGTRHFDAMVSTLVRAGRARGMVAASLAAGKRQEAYGLCQMHYATAAAVVATGFEHGRRXXXXXXXXXXXXXXXXSRNSLERFAKEFGLNLPP 3050
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19317.5353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L563_9PHAE5.260e-4044.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSU3_ECTSI2.090e-3642.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19317contigH-elongata_contig19317:2730..5173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19317.5353.1mRNA_H-elongata_contig19317.5353.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19317 2217..5638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19317.5353.1 ID=prot_H-elongata_contig19317.5353.1|Name=mRNA_H-elongata_contig19317.5353.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp
MLGACPFPERLDMPWFSSTLAGLGSRFHRPAVRAALFISKPATRTDAVLK
AVEEGGVSAAVALDELRPVVDPDDGWCYAGLANQATLETVFLWIDRHGTY
GNLFDSRHFMAMASTLVSAGRARGLVASCLANERRKEACAVCRMHYRAKA
ASTGENPEAAGIKGDGGEGGLRSVRQTDEFLKRFAEEFGVELLPSCPDG*
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