prot_H-elongata_contig192814.5335.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig192814.5335.1
Unique Nameprot_H-elongata_contig192814.5335.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig192814.5335.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.330e-14
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 RYQKEDYTIASPLGGGQIAAFEAITKRFIADGAPDEVNI 39
            RYQ EDYTIASPLGGG+I AFEAI KRF+ DGAPDEVN+
Sbjct:  310 RYQNEDYTIASPLGGGKIEAFEAIAKRFVEDGAPDEVNL 348          
BLAST of mRNA_H-elongata_contig192814.5335.1 vs. uniprot
Match: D7G1D4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D4_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 3.620e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 RYQKEDYTIASPLGGGQIAAFEAITKRFIADGAPDEVNI 39
            +Y+  DY+IA P+   Q AAF AI KRF+ADGA DE+NI
Sbjct:  104 QYESGDYSIAKPIAS-QFAAFNAIVKRFVADGALDEINI 141          
BLAST of mRNA_H-elongata_contig192814.5335.1 vs. uniprot
Match: A0A6H5KIU5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU5_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 4.510e-6
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 RYQKEDYTIASPLGGGQIAAFEAITKRFIADGAPDEVNI 39
            +Y+  DY+IA P+   Q AAF AI KRF+ DGA DE+NI
Sbjct:   32 KYESGDYSIAKPIAS-QFAAFNAIVKRFVVDGALDEINI 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig192814.5335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGT8_9PHAE6.330e-1482.05RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G1D4_ECTSI3.620e-658.97RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KIU5_9PHAE4.510e-656.41RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig192814contigH-elongata_contig192814:755..877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig192814.5335.1mRNA_H-elongata_contig192814.5335.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig192814 755..877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig192814.5335.1 ID=prot_H-elongata_contig192814.5335.1|Name=mRNA_H-elongata_contig192814.5335.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
RYQKEDYTIASPLGGGQIAAFEAITKRFIADGAPDEVNIW*
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