prot_H-elongata_contig19257.5329.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19257.5329.1
Unique Nameprot_H-elongata_contig19257.5329.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length707
Homology
BLAST of mRNA_H-elongata_contig19257.5329.1 vs. uniprot
Match: D8LQN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN1_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 5.860e-115
Identity = 329/801 (41.07%), Postives = 433/801 (54.06%), Query Frame = 0
Query:    1 RLDDIEDRCSKSEETLLCSEERLREVHEEIATVTKRAMELEMQLREDEERLSNLESLKKARKFHWCFNRAHQRRLSDLRLEID-GIPVDGGI--LRPEPVETSAERMTRLIKAAGTATDLLASDVARILD----NANETSVT--DDSWVGHGGN---GRRQSMSDV---IRQLQQISGKAQKYSHRCST----------------GWDQDSNGNVEGYAIECAEALGAHIEETLST-------------LYNTGNNNGRSKLPHEWWASTSNFTDTPDNGRRDLCQTLKTARDALLLVIGERTSPGGLRLALLVLKARLG---------DFVEAELRELHVRVSTFDSKLGV------GSGGDRGGV------NRTELEDRLAVKADVSWVQRELERLWDAMGSRVL-------PPTDGGSDQAVR--LCSPKSARLHQACKET--PETAGEESDE--SPPPRDLPRSIS--LSPAALLAARVEENPVVEDDDQ-----HRSSSEEWPSLIKDLLRKTSRLEKQMASKADNDEVARALSSVGVKLRNISSIIPTIEEALSSKIEKKDLSKLTTLISNGVNGSASPRERGEKG---NGGSDATNPTVLASRLNTKFRCLSCDRPLPSLGTPGTPKLALTGLSMAGVGTPRSPHRIT---RLRLTATGDDAS--TSQPNSPATSASRPHGENY-DVVG-SCGSSGIALTASDSSPRTTQGNATTKDVGQRRRPGSGIAKTGGASGEQPGRLEPIGANAPGELITGVMSRYPRMMPPPSRIRTAAGGGGAGLGSRPGSSLGGRL 706
            +L+D++DR ++SEE L  +EER+ E                     DE+RL +LE+LKKA          HQRRLS+LR++++ G P  GG   +  EP ET AERM RL+K AGTAT+ LA D+ +ILD    NA + + T  D++   H        R S S+V   +++L+ +S  A + S  C+                 G    S+ NV+  A+   EAL  HI++ LST             L  TG    +  L                NGR+DL Q L  ARDALL VIGER+S G LR+A L L A +          D +E    +L  RVS  D+ +          G  R G       N  +LE+RL  KADVSWVQREL+RLWDA+ +R +       P T  G  +        P+SA      KE   PETAG+E  +  + P +   R IS  L  +AL  A            Q      R+S  E  SLIKDL++KTSRLE+QMA+KADN+EV +AL+SVG KLR +  +IP ++E L++KIE+KDL+KL +++SNG  G+  P   G +G   NG   A    V+ASRLN+KFRCLSCDRPLP+LG PG PKL  +GLSMAG GTPRSP + +   RL+LTA  +  +   S+P SPAT++  P  E+  DV G   GSS + +    S   +  GN   KD G RRR      +      + PGRLEP+GAN  GE + GV+SRYPRMMPPPSRIRTAAGGG   +GSRP SS GGR+
Sbjct:  527 KLEDMDDRYARSEEALRRAEERIGEXXXXXXXXXXXXXXXXXXXXVDEDRLGSLENLKKA----------HQRRLSELRVQLESGTPAAGGAVPIETEPEETDAERMARLLKTAGTATEFLAEDLDKILDSNGGNAGDATATAADNAEANHELGQVLSARSSASNVDHALQELRHVSVNAVECSRLCNDVASASGQAERDEIGPDGGGAGSDSNVDA-AVRRVEALCGHIQDLLSTQDKNISSSKNKAELSATGEIERQGSLEGNGGVGLKIDDIVCPNGRKDLVQRLTAARDALLPVIGERSSVGSLRVAFLGLTASVRANLEEKQARDLMEERWNDLRGRVSGLDTSVSDIKDSLHDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARAMAAVGAMSPRTGAGVTEGHGGDPSRPRSAPPTNYDKENHNPETAGQEEGDLDASPSQANSRVISGSLPSSALSTALGXXXXXXXXXXQGAVGGRRASFNEGASLIKDLMKKTSRLEQQMATKADNEEVMKALASVGNKLRKVGIVIPAMQEELANKIERKDLAKLVSMVSNG-GGTGEPPPGGHEGPHNNGDGSA----VVASRLNSKFRCLSCDRPLPALGPPGPPKLGASGLSMAGAGTPRSPQKTSSQQRLKLTAAEEPGADKNSRPGSPATTS--PAVEDVGDVAGWGRGSSNMMIPGGASDMESAYGNGG-KDAGARRRQKQ-QHRQHHEMDQPPGRLEPLGAN--GEHMAGVLSRYPRMMPPPSRIRTAAGGG---IGSRPSSSSGGRI 1302          
BLAST of mRNA_H-elongata_contig19257.5329.1 vs. uniprot
Match: A0A6H5LPN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPN1_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 1.220e-85
Identity = 292/788 (37.06%), Postives = 392/788 (49.75%), Query Frame = 0
Query:   77 DLRLEID-GIPVDGGI--LRPEPVETSAERMTRLIKAAGTATDLLASDVARILDNANETSVTDDSWVGHGGNGR-----------RQSMSDV---IRQLQQISGKAQKYSHRCST----------------GWDQDSNGNVEGYAIECAEALGAHIEETLSTLY-NTGNNNGRSKLPHEWWASTSNFTD------------TPDNGRRDLCQTLKTARDALLLVIGERTSPGGLRLALLVLKARLG---------DFVEAELRELHVRVSTFDSKLG------VGSGGDRGGV------NRTELEDRLAVKADVSWVQRELERLWDAMGSRVL-------PPTDGG--SDQAVRLCSPKSARLHQACKET--PETAGE-ESD-ESPPPRDLPRSISLS-PAALLAARVEENPVVEDDDQ-----HRSSSEEWPSLIKDLLRKTSRLEKQ--------------------------------------------------------------MASKADNDEVARALSSVGVKLRNISSIIPTIEEALSSKIEKKDLSKLTTLISNGVNGSASPRERGEKG---NGGSDATNPTVLASRLNTKFRCLSCDRPLPSLGTPGTPKLALTGLSMAGVGTPRSPHRIT---RLRLTATGDDAS--TSQPNSPATSASRPHGENY-DVVGSCGSSGIALTASDSSP-RTTQGNATTKDVGQRRRPGSGIAKTGGASGEQPGRLEPIGANAPGELITGVMSRYPRMMPPPSRIRTAAGGGGAGLGSRPGSSLGGRL 706
            +LR++++ G P  GG   +  EP ET  +RM RL+K A TAT+ LA D+ +ILDN    +   D+     GN             R S S++   +++L+ +S  A + S  C+                 G    S+ NV+  A+  AEAL   I++ LS    N  +N  +++L   +        +               NGR+DL Q L  ARDALL VIGER+S G LR+ LL L A +            +E    +L  RVS  ++ +       +  G  R G       N  +LE+RL  KADVSWVQREL+RLWDA+ +R +       P T  G    Q      P+S       KE   PETAG+ E D E+ P +   R IS S P++ L+  +          Q      R+S  E  SLIKDL++KTSRLE+Q                                                              MA+KADN+EV +ALSSVG KLR +  +IP ++E L++KIE+KDL+KL +++SNG  G+  P   G +G   NG S A    V+ASRLN+KFRCLSCDRPLP+LG PG PKL  +GLS+AG GTPRSP +     RL+LTA  +  +   ++P SPAT++  P  E+  DV G  G          +S   +T GN   KD G RR       +  G   + PGRLEP+GAN  GE + GV+SRYPRMMPPPSRIRTAAGGG   +GSRP SS GGR+
Sbjct:  577 ELRVQLESGTPAAGGAVPIETEPEETGEDRMARLLKTASTATEFLAEDLDKILDNNGGNA--GDATATAAGNAEANHELGQVQSARSSDSNIDHALQELRHVSIDAVECSRLCNDVANASGQAEGDEIGPDGGGAGSDHNVDA-AVCRAEALCGRIQDLLSAHEKNISSNKKKAELSATFEIERQGSLEGNGGMGLKLDDIVCSNGRKDLVQRLTAARDALLPVIGERSSVGSLRVTLLGLTASVRANLEEKQARKLMEERWNDLRGRVSELNTSVSDIKDSLLDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARTMAAVGALSPRTGAGVREGQGGDPSRPRSTPSTDYDKENHNPETAGQAEGDLEASPSQANSRVISGSLPSSALSTALGXXXXXXXXXQGAVGGRRASVNEGASLIKDLMKKTSRLEQQRLHERVLVMFHFSAMTVCCMFTPPLSLLPSWLGDATSRFDFFDFVLHPRPRYHAVWNPTVRKMATKADNEEVMKALSSVGNKLRKVGIVIPAMQEELANKIERKDLAKLVSMVSNG-GGTGEPPPGGHEGPHNNGDSSA----VVASRLNSKFRCLSCDRPLPALGPPGPPKLGASGLSIAGAGTPRSPQKPKSQQRLKLTAAEEPGAEKNARPGSPATTS--PAVEDVGDVAGWGGXXXXXXXPGGASDMESTYGNGG-KDAGARRXXXXXHRQQHGMD-QPPGRLEPLGAN--GEHMAGVLSRYPRMMPPPSRIRTAAGGG---IGSRP-SSSGGRI 1346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19257.5329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQN1_ECTSI5.860e-11541.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPN1_9PHAE1.220e-8537.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..57
NoneNo IPR availableCOILSCoilCoilcoord: 426..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19257contigH-elongata_contig19257:80..3318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19257.5329.1mRNA_H-elongata_contig19257.5329.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19257 80..3318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19257.5329.1 ID=prot_H-elongata_contig19257.5329.1|Name=mRNA_H-elongata_contig19257.5329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=707bp
RLDDIEDRCSKSEETLLCSEERLREVHEEIATVTKRAMELEMQLREDEER
LSNLESLKKARKFHWCFNRAHQRRLSDLRLEIDGIPVDGGILRPEPVETS
AERMTRLIKAAGTATDLLASDVARILDNANETSVTDDSWVGHGGNGRRQS
MSDVIRQLQQISGKAQKYSHRCSTGWDQDSNGNVEGYAIECAEALGAHIE
ETLSTLYNTGNNNGRSKLPHEWWASTSNFTDTPDNGRRDLCQTLKTARDA
LLLVIGERTSPGGLRLALLVLKARLGDFVEAELRELHVRVSTFDSKLGVG
SGGDRGGVNRTELEDRLAVKADVSWVQRELERLWDAMGSRVLPPTDGGSD
QAVRLCSPKSARLHQACKETPETAGEESDESPPPRDLPRSISLSPAALLA
ARVEENPVVEDDDQHRSSSEEWPSLIKDLLRKTSRLEKQMASKADNDEVA
RALSSVGVKLRNISSIIPTIEEALSSKIEKKDLSKLTTLISNGVNGSASP
RERGEKGNGGSDATNPTVLASRLNTKFRCLSCDRPLPSLGTPGTPKLALT
GLSMAGVGTPRSPHRITRLRLTATGDDASTSQPNSPATSASRPHGENYDV
VGSCGSSGIALTASDSSPRTTQGNATTKDVGQRRRPGSGIAKTGGASGEQ
PGRLEPIGANAPGELITGVMSRYPRMMPPPSRIRTAAGGGGAGLGSRPGS
SLGGRL*
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