prot_H-elongata_contig19178.5308.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19178.5308.1
Unique Nameprot_H-elongata_contig19178.5308.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A6H5KIP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP7_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 4.430e-83
Identity = 132/164 (80.49%), Postives = 145/164 (88.41%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAELKRIDAAS 164
            R NDPEVEVLKLHHYLGPDVNTAVI+AVL+AL +N NCQALYIQNFN+GFRDEQV  ALAKVLR+GNIWCLNAGE+Y V L+ WW+FVE IK TNVTHAYLSEHVIT ELK AMR AIRDNR KH+RHK A+NL+VIRRCTNMWWNPINSK LQAELK +D  +
Sbjct:  682 RANDPEVEVLKLHHYLGPDVNTAVIDAVLEALMVNDNCQALYIQNFNEGFRDEQV-GALAKVLRRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSAANLEVIRRCTNMWWNPINSKFLQAELKVLDGGN 844          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: D7FZY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY3_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.090e-75
Identity = 118/144 (81.94%), Postives = 128/144 (88.89%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMW 144
            R NDPEVEVLKLHHYLGPDVNTAVI+AVL+AL +N NCQALYIQNFN+GFRDEQV  ALAKVL +GNIWCLNAGE+Y V L+ WW+FVE IK TNVTHAYLSEHVIT ELK AMR AIRDNR KH+RHK ASNL+VIRRCTNMW
Sbjct:  310 RANDPEVEVLKLHHYLGPDVNTAVIDAVLEALMVNDNCQALYIQNFNEGFRDEQVE-ALAKVLGRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSASNLEVIRRCTNMW 452          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.240e-60
Identity = 104/166 (62.65%), Postives = 129/166 (77.71%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAELKRIDAASFG 166
            R +DP V+VLKLH Y+  DV T +I+AVL+AL +N+NCQALYIQN ++GFRDEQ+   LA+VLR+G IWCLNAGE+  +  S WW FVE+I+ TNVTHAYLSE  +   LK AM+ AIR NR KH RH  ASN+DVI+RCT+MWWNPI SK+LQAELK  + A+ G
Sbjct:  594 RADDPRVKVLKLHDYIPADVGTIIIDAVLEALMINSNCQALYIQNVSNGFRDEQLMR-LAEVLRRGLIWCLNAGENSEIKASTWWNFVEEIQNTNVTHAYLSEGSVPSGLKNAMQKAIRRNRLKHDRHLSASNVDVIQRCTHMWWNPIRSKKLQAELKAAEVAAKG 758          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A835ZG86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG86_9STRA)

HSP 1 Score: 209 bits (532), Expect = 9.770e-60
Identity = 99/157 (63.06%), Postives = 123/157 (78.34%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGN-IWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAE 156
            R +  +VEVLKLHHYL PD NTAV++AVLDAL+ NTNCQALY+QNFN G  D+Q+  ALA +LR  + +WCLN GE Y V+L  WW+F E+++ T+VTH YLSEHV+T +LK AMR AIR NRAKH+ HK   NL VI RCTNMWWNPIN+++LQ +
Sbjct:  636 RADHRDVEVLKLHHYLSPDANTAVMDAVLDALASNTNCQALYMQNFNSGVTDDQI-DALAAILRTHDRLWCLNLGELYKVTLDRWWKFCEELRGTHVTHMYLSEHVLTADLKTAMRDAIRANRAKHALHKDVDNLAVIERCTNMWWNPINARDLQGD 791          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.600e-59
Identity = 108/158 (68.35%), Postives = 125/158 (79.11%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAELK 158
            R +DP VEVLKLH+Y+  DV+T VI+AVL+AL +N NCQALYIQN ++G RDEQ+   LAKVLRKGNIWCLNAGE+  +  S W +FV++I  T VTHAYLSE  I   LK AMRTAIR NR KH+RHK ASN+ VIRRCTNMWWNPI  KELQAELK
Sbjct:  790 RTDDPRVEVLKLHNYIPADVSTPVIDAVLEALMLN-NCQALYIQNVSNGLRDEQLMM-LAKVLRKGNIWCLNAGENSKIKPSTWCDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIRRCTNMWWNPILCKELQAELK 945          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.700e-59
Identity = 104/158 (65.82%), Postives = 124/158 (78.48%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAELK 158
            R +DP VEVLKLH+Y+  DV T VI+AVL+AL +N NCQALYIQN ++G RDEQ+   LA+VLRKGNIWCLNAGE+  +  S W +FV++I+ T VTHAYLSE  I   LK AMRTAIR NR KH+RHK ASN+ VIR+CTNMWWNP+  KE QAELK
Sbjct:  729 RTDDPRVEVLKLHNYIPADVCTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQLMM-LARVLRKGNIWCLNAGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPVGLKKAMRTAIRANRVKHTRHKSASNVKVIRQCTNMWWNPVLCKESQAELK 885          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.130e-57
Identity = 97/144 (67.36%), Postives = 114/144 (79.17%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMW 144
            R +DP VE+LKLH YL  DV+T +INAVL AL  N+NCQALYIQN + GFRDEQ+R  LAKVLR+GNIWCLNAGE+  ++ S WW FVE+IK T+VTHAYLSE  I   L   M+ AIR NRAKH+RHK ASN++VIRRCTNMW
Sbjct:  224 RADDPRVEILKLHDYLPADVSTPIINAVLKALMCNSNCQALYIQNVSIGFRDEQLRM-LAKVLRRGNIWCLNAGENSGITPSAWWWFVEEIKTTSVTHAYLSEECIPCGLTETMQKAIRANRAKHTRHKSASNVEVIRRCTNMW 366          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A7S2G2D6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2D6_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.450e-53
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKEL 153
            R N  +  VLKL  YLGP+VNT +I+++LDAL +N+NCQALYIQNFNDG  D Q++  L+KVL+ G IWCLN GE+Y ++   W +F + + ATNVTH Y SEHVI+ E K  MR  IR NRAKHSRH    N+ VI+RCTN WWNPI S+ L
Sbjct:   71 RDNHSDAVVLKLKDYLGPEVNTWIIDSILDALMVNSNCQALYIQNFNDGMLDVQLQK-LSKVLQLGRIWCLNIGENYRITPGAWNQFADSLLATNVTHMYASEHVISVEQKTRMRDIIRANRAKHSRHNSIDNIAVIKRCTNCWWNPIQSRSL 222          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 7.910e-51
Identity = 90/138 (65.22%), Postives = 108/138 (78.26%), Query Frame = 0
Query:    1 RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIR 138
            R +DPEVEVLKLH+Y+  DV+T VI+AVL+AL +N NCQALYIQN ++G RDEQ+   LAKVLR+GNIWCLNAGE+  +  S W +FV++I  T VTHAYLSE  I   LK AMRTAIR NR KH+RHK ASN+ VIR
Sbjct:  224 RTDDPEVEVLKLHNYIPADVSTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQIMM-LAKVLRRGNIWCLNAGENSKIKPSTWRDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIR 360          
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Match: A0A7S0BXF2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXF2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.840e-48
Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = 0
Query:    3 NDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGFRDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAYLSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINSKELQAELK 158
            N  ++ V KL  +L PD    V++AVLDAL  NTNCQ+LYIQNFN+G RD+QV   L  +L+KG+IWC+N GE+Y V    W +F   ++ TNVTH Y SEH I  ELK  +R  IR NR KH  H    NLDVI +CT+ WWNPIN+K LQ  LK
Sbjct:  164 NADDMVVCKLKVWLSPDTPMLVMDAVLDALDNNTNCQSLYIQNFNEGMRDKQVLRLLT-ILKKGHIWCINIGETYKVRSKTWEKFARGLRKTNVTHMYASEHTIDTELKDKIRGIIRQNRMKHRLHISPDNLDVIVQCTHCWWNPINAKALQPVLK 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19178.5308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIP7_9PHAE4.430e-8380.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY3_ECTSI2.090e-7581.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNB8_9PHAE1.240e-6062.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZG86_9STRA9.770e-6063.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K7R7_9PHAE2.600e-5968.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUR8_9PHAE5.700e-5965.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFH6_ECTSI1.130e-5767.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2G2D6_9STRA4.450e-5358.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6H5JA48_9PHAE7.910e-5165.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S0BXF2_9STRA4.840e-4853.85Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039715Zinc finger CCHC domain-containing protein 10PANTHERPTHR13491ZCCHC10 PROTEINcoord: 3..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19178contigH-elongata_contig19178:313..2298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19178.5308.1mRNA_H-elongata_contig19178.5308.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19178 313..2298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19178.5308.1 ID=prot_H-elongata_contig19178.5308.1|Name=mRNA_H-elongata_contig19178.5308.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
RLNDPEVEVLKLHHYLGPDVNTAVINAVLDALSMNTNCQALYIQNFNDGF
RDEQVRSALAKVLRKGNIWCLNAGESYNVSLSNWWEFVEDIKATNVTHAY
LSEHVITPELKIAMRTAIRDNRAKHSRHKIASNLDVIRRCTNMWWNPINS
KELQAELKRIDAASFG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039715ZCCHC10