prot_H-elongata_contig19141.5293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19141.5293.1
Unique Nameprot_H-elongata_contig19141.5293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length280
Homology
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 7.240e-103
Identity = 163/279 (58.42%), Postives = 191/279 (68.46%), Query Frame = 0
Query:    1 MKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNLNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETCGL 279
            +KLELGAVGVF+GTA F DNSIIST +D      T  EI RKGGAIH KG LTFEKDA F+ NLNDR  YGSGPGGAIS HVK ++ F G L MT+N ADDY+GGA+GGA FNRGD+VVDGEA F  N GGRGGAI+QEKW T VFN F TF +N+C+DT+GG +AN GG     AGS + +   +NSGDGG              L GST F+ NY  WGGA+ N   P+ Y      ++Y +P I+YP+DT+FEDN     YC D   DFDEETCGL
Sbjct:  107 LKLELGAVGVFKGTAEFSDNSIISTSIDES----TEEEILRKGGAIHTKGSLTFEKDATFSGNLNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTA-EDESYVMPTISYPEDTIFEDNDA--QYCNDFASDFDEETCGL 378          
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.340e-55
Identity = 126/282 (44.68%), Postives = 157/282 (55.67%), Query Frame = 0
Query:    6 GAVGVFEGTATFHDNSIISTLLDS----DAAPWTS---GEIKRKGGAIHNKGDLTFEKDAVFTNN-LNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYS-SDTYKVPIITYPDDTVFEDN-GDFDSYCPDVMYDFDEETC 277
            GA   F GT+ F DNS+    L +    D    T      + +KGGAIHNKG LTFE DA F  N ++  +    G  GAISN    T+ FK  L M +N A+ ++ G  GGA +NRG+++VDGE++F  N    GG IYQ   G   FNS ATF  N   +  GGG+ NYGG  +  AGS +       SGDGG GG IYN N G VTL GST F+ N A  GGAI        Y+DD S ++     + T+PDDTVFEDN  DF   CPDV +D D + C
Sbjct:  110 GATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGL-GGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAI--------YTDDGSVANGEAASVTTFPDDTVFEDNRADF---CPDV-FDGDNDNC 378          
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.050e-54
Identity = 123/284 (43.31%), Postives = 153/284 (53.87%), Query Frame = 0
Query:    6 GAVGVFEGTATFHDNSIISTLLDSDAAPWTSGE-----------IKRKGGAIHNKGDLTFEKDAVFTNN-LNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETC 277
            GA   F GT+ F DNS+    +     P + G+           I +KGGAIHNKG LTFE DA F  N ++  +    G  GAISN    T+ FK  L M +N AD ++ G  GGA +NRG++VV+GE++F  N    GG IYQ   GT  FN  ATF  N   D  GGG+ N GG  +  AGS +       SGDGG GG IYN N GVVTL GST F+ N A  GGAI         SD    +     + T+PDDTVFEDN     +CPDV ++ D + C
Sbjct:  110 GATATFMGTSEFSDNSVAVKQI----GPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGI-GGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYT-------SDGDEENGEPASVTTFPDDTVFEDNSA--EHCPDV-HNGDSDNC 378          
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.250e-35
Identity = 92/240 (38.33%), Postives = 120/240 (50.00%), Query Frame = 0
Query:   39 IKRKGGAIHNKGDLTFEKDAVFTNNLNDREEYGS-GPGGAISNHVKATMTFKGSLNMTENTADDYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFATFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFEDNGDFDSYCPDVMYDFDEETC 277
            I +KGGAIHNKG LTF+ DA F  N+   E     G GGAISN    T+ FK  L M +N AD  + G  GGA +NRG+++V+G ++F  N    GG I+Q   GT  FN  ATF  N   +  GGG+ N GG  +  AGS + +     SGDGG GG I+N                    WGGAI        Y++D         + T+PDD           YCPDV ++ D++ C
Sbjct:   35 IVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGL-GGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAI--------YTNDADGPG---SVTTFPDDXXXXXXRA--EYCPDV-HNGDDDNC 259          
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.960e-8
Identity = 85/285 (29.82%), Postives = 119/285 (41.75%), Query Frame = 0
Query:   12 EGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNL----NDREEYGSGPGGAISNHVKATMTFKGSLNMTE---NTADDY---YGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGT--FVFNSFATFDANRCIDTYGGGVANYG-----GTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFE----DNGDFDSYCPDVMYDFDEE 275
            EG A F D    S  + S        +  + GG I+N+G + FE    FT +     +  E+Y  G GGA+ N   A + FK ++ MT       +DY   Y G EGGA +  G +    +AVF DN G  GGA++    G   F+  S ATF A    +  GG + N G      T  F+ G S  +    N+GD             +V ++      N+    GGAIA   YP+              I   P D  +E     N D+D  CPDV  +  E+
Sbjct:   24 EGYARFLD----SVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFE--GTFTADACRVGSTAEKY-PGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGGTGVVKFLKRSKATF-ARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDASE----------MVFIKHVNFIGNSADAHGGAIAT-TYPN--------------IEFLPQDATYEGNVLQNADYDYVCPDVYVNGSED 275          
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 4.690e-7
Identity = 85/285 (29.82%), Postives = 120/285 (42.11%), Query Frame = 0
Query:   12 EGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKGDLTFEKDAVFTNNL----NDREEYGSGPGGAISNHVKATMTFKGSLNMTE---NTADDY---YGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGT--FVFNSFATFDANRCIDTYGGGVANYG-----GTFDFKAGSSWVNQIGDNSGDGGTGGGIYNENGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYPDDTVFE----DNGDFDSYCPDVMYDFDEE 275
            EG A F D    S  + S        +  + GG I+N+G + FE    FT +     +  E+Y  G GGA+ N   A + FK ++ MT       +DY   Y G EGGA +  G +    +AVF DN G  GGA++        F+  S ATF A    +  GG + N G      T  F+ G S  +    N+GD        +E   +V ++      N+    GGAIA   YP+              I   P D  +E     N D+D  CPDV  +  E+
Sbjct:  130 EGYARFLD----SVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFE--GTFTADACRVGSTAEKY-PGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGVTAVVKFLKRSKATF-ARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGD-------VSE---MVFIKHVDFIGNSADAHGGAIAT-TYPN--------------IEFLPQDATYEGNVLQNADYDYVCPDVYVNGSED 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19141.5293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE7.240e-10358.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ44_ECTSI1.340e-5544.68Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI1.050e-5443.31Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI2.250e-3538.33Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5L171_9PHAE1.960e-829.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G627_ECTSI4.690e-729.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19141contigH-elongata_contig19141:1420..4712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19141.5293.1mRNA_H-elongata_contig19141.5293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19141 31..4731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19141.5293.1 ID=prot_H-elongata_contig19141.5293.1|Name=mRNA_H-elongata_contig19141.5293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MKLELGAVGVFEGTATFHDNSIISTLLDSDAAPWTSGEIKRKGGAIHNKG
DLTFEKDAVFTNNLNDREEYGSGPGGAISNHVKATMTFKGSLNMTENTAD
DYYGGAEGGAFFNRGDVVVDGEAVFKDNFGGRGGAIYQEKWGTFVFNSFA
TFDANRCIDTYGGGVANYGGTFDFKAGSSWVNQIGDNSGDGGTGGGIYNE
NGGVVTLEGSTEFKNNYARWGGAIANRIYPSTYSDDYSSDTYKVPIITYP
DDTVFEDNGDFDSYCPDVMYDFDEETCGL*
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