prot_H-elongata_contig190943.5277.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190943.5277.1
Unique Nameprot_H-elongata_contig190943.5277.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig190943.5277.1 vs. uniprot
Match: A0A6H5JWV5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWV5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 7.030e-29
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 0 
Query:    1 FFCTYQGVKYGAALFRQEEDIWNVIIASAGSFGPMIPFPAMRNRYPYAAVLIGMDTLNNHIL 62
            FFCTYQG+KYGA L R+E+D WNV+IASAGSF PM+  PAMR+RYPYAA+LI MDTLNNHIL
Sbjct:  108 FFCTYQGMKYGAKLARKEDDFWNVLIASAGSFAPMLVVPAMRSRYPYAAILIAMDTLNNHIL 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190943.5277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JWV5_9PHAE7.030e-2977.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190943contigH-elongata_contig190943:887..1075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190943.5277.1mRNA_H-elongata_contig190943.5277.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190943 887..1075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190943.5277.1 ID=prot_H-elongata_contig190943.5277.1|Name=mRNA_H-elongata_contig190943.5277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
FFCTYQGVKYGAALFRQEEDIWNVIIASAGSFGPMIPFPAMRNRYPYAAV
LIGMDTLNNHIL*
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