prot_H-elongata_contig19088.5274.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19088.5274.1
Unique Nameprot_H-elongata_contig19088.5274.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length232
Homology
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 2.990e-64
Identity = 117/233 (50.21%), Postives = 156/233 (66.95%), Query Frame = 0
Query:    1 MLKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDIT-THIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNI--LLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVV 230
            ML  +   +T+DGWTS +N++Y S T ++I+ E+ L  L++ C K    T G DLA  V G+++ H + GRV A VTDCEPSMI  GR L+    T +HIGC NHR   TT+ VF+G  + A + L + LV  Y KSSQMA RL ++CGIL++  L V+QDVETRW S +  V R   L  AI+LHE +D +  LL+D DWEVL+LIE  LRPFM+A  +LEGA+YVTGS+ +
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGA-LGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTI 266          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 7.850e-64
Identity = 116/234 (49.57%), Postives = 154/234 (65.81%), Query Frame = 0
Query:    1 MLKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITT-HIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNI--LLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            ML  ++  +T+DGWTS SN++Y S T ++I+  + L  L++ C K    T G DLA  +  +I+ HG+ GRV A VTDCEPSM+  GR L+       HIGC NHR   TT+ VF+G  + A +A  +A+V  Y +SSQM+ RL    GILK+  L V+QDVETRW S +  +ER   L  AI+LHE  DNI  +L++ DWEVL+LIE  LRPFM+A  +LEGAKYVTGS+ VP
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGA-LAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVP 303          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 4.740e-63
Identity = 111/232 (47.84%), Postives = 146/232 (62.93%), Query Frame = 0
Query:    2 LKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNI--LLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            L  +H  VTSDGWTS SNDTY  FT ++I   FDL  L + CKK   +T G DL + VK +I  +G+  R  A  TDCEPSM+  GR L+E +  TH+GC  HR    T+  F GPGV   +AL + +VT Y  SSQ +DRLE+M  I++V   +VVQDVETRW S + S+ R   LR  I  HER+D+I  LL + DWEVL+++E   +PF+ +    E +K VT SLV+P
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIP 276          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.810e-62
Identity = 114/229 (49.78%), Postives = 147/229 (64.19%), Query Frame = 0
Query:    5 QHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNI--LLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            +H  +TSDGWT  SNDTY SFT ++I   FDL  L + CKK   +TAG DL + VK +I  +G+ GR  A  TDCE SM+  GR L+E +  TH+GC  HR    T+  F GPGV   +AL + +VT YT SSQ +DRLE++C I++V    VVQDVETRW S ++S+ R   LR  I  HE +D+   LL + DWEVL+L+ES L+PFM A   LE +K VT  LV P
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSP 232          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.090e-50
Identity = 98/216 (45.37%), Postives = 128/216 (59.26%), Query Frame = 0
Query:   16 SCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNI--LLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLV 229
            S SNDTY +FT ++I   FDL  L +  KK   +T G DL + VK +I  +G+ GR  A  TDCEP M+  GR L+E +  +H+GC  HRF   T+  F GPGV   +AL + +VT YT SSQ ++RLE+MC I++V   +VVQDVETRW S                    +D+I  LL + DWEVL+L+E  L PFM A   LE +K VT SLV
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLV 202          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.130e-35
Identity = 73/165 (44.24%), Postives = 102/165 (61.82%), Query Frame = 0
Query:    1 MLKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELK-ERDITTHIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGI-LKVPSLQVVQDVET 163
            +++ +   +TSDGWTSC+NDTY S T + I   + L  L++ C K    T G  LA  +K  +  HG+ G+V A  TDCEPSM+  GR L  +  ++T IGCCN+R   T+++VF+GP VK  M L + LVT Y  SSQ ADRL++     L V + +V+QDV T
Sbjct:   35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: UPI0013B3E255 (zinc finger BED domain-containing protein 1-like n=1 Tax=Xiphophorus helleri TaxID=8084 RepID=UPI0013B3E255)

HSP 1 Score: 99.4 bits (246), Expect = 9.570e-21
Identity = 65/229 (28.38%), Postives = 115/229 (50.22%), Query Frame = 0
Query:    9 VTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFSG-PGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQ-----LHERLDNILLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            +TSD WTS + D Y + T  F+E+   L  + +G +   +     ++A     L++  G++G+V   VTD  P+M+ C RELK R    H  C  H             P +    A  + LV  +  S+   ++L ++   L + + +++Q+VETRWNS ++ ++R  +LR+ +      LH  +     T  +++++    S L PF +A TEL   ++V+ S V+P
Sbjct:  127 LTSDMWTSINMDAYLAVTCHFVEENKKLSSVLLGVQAFPQSHTAENIACVKASLMEEWGISGKVTCMVTDGAPNMVACMRELKLR----HHICVAHTLNLAVKRALDQHPVLSGLRAKARKLVGCFRSSTTAKEKLTQVQLQLGMQATKLMQEVETRWNSTYLMLQRLVELREPVGAALAGLHTGIP--FFTASEFDIVVACLSLLSPFYDATTELSAEEHVSASKVIP 349          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: A0A3B1JXH3_ASTMX (BED-type domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1JXH3_ASTMX)

HSP 1 Score: 98.2 bits (243), Expect = 6.420e-20
Identity = 67/233 (28.76%), Postives = 111/233 (47.64%), Query Frame = 0
Query:    3 KRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRF-YCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRD---AIQLHERLDNILLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            K    ++TSD WTS   D Y + T   I ++ +L    +G  K  +  +  +LA+    L+   G+  +V   VTD  P+M+ C   LK      H  C  H         +   PG++   +  + +   +  S+   +RL +M G +  P+L+++Q+VETRWNS F  ++R  Q R+   A  +  + D   LT +++  +      L  F EA TEL   + V+GS V+P
Sbjct:  148 KATAVSLTSDMWTSIHMDAYLAITCHLINEKDELSTFLLGVGKFPKSHSAENLAEVKTALMAEWGIQKKVRCLVTDAAPNMVACAGLLK----MLHTICIAHALNLIVKKAIDQTPGLEHIRSKARKIAGYFRSSTTAKERLFQMQGQMGRPTLKLIQEVETRWNSTFAMLQRMYQQREPVGAALVTLKTDLTPLTSEEYHTINECLGVLSTFNEATTELSEERRVSGSKVIP 376          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: UPI001F088102 (zinc finger BED domain-containing protein 4-like n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F088102)

HSP 1 Score: 95.9 bits (237), Expect = 2.340e-19
Identity = 66/235 (28.09%), Postives = 110/235 (46.81%), Query Frame = 0
Query:    1 MLKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFS-GPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRDAIQL---HERLDNILLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            M + Q  ++TSD WTS + D + + T  FI+ +F L  +  G  K  +      + +    L++  G+  +V   +TD   +MI+C + LK R    H+ C  H             P ++      + +V  +  S+   +RL    G L +P+L++VQ+VETRWNS F  +ER  + R A+        +D   L+  + + +      L PF  A+ EL   K V+ S V+P
Sbjct:    4 MSEVQSVSLTSDMWTSMNMDAFLAITCHFIDADFKLSTVLFGVTKFPQTHTAEHIKEAKNVLLEEWGLKDKVHCLITDNASNMILCAKLLKMR----HVPCFAHTLNLVVKKALEVTPEIQDIRTRTRRIVAFFKSSTNAKERLSVTQGQLGIPTLKLVQEVETRWNSTFQKLERMYEQRLAVGAALGSLTMDIPALSTTELQTVSECLEILGPFNHANVELSEEKRVSSSKVIP 234          
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Match: UPI0007425A22 (zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI0007425A22)

HSP 1 Score: 94.7 bits (234), Expect = 2.770e-19
Identity = 62/226 (27.43%), Postives = 114/226 (50.44%), Query Frame = 0
Query:    9 VTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKTAGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIGCCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGILKVPSLQVVQDVETRWNSRFISVERTRQLRD---AIQLHERLDNILLTDDDWEVLKLIESFLRPFMEAHTELEGAKYVTGSLVVP 231
            +T+D WT  + D Y +    F++D+  L  + +G +   +     ++A   K +++  G++ +V   VTD  P+M+ C RELK R    HI   +         +   P +    A    LV     S+ + ++L ++   L +  L+++Q+VETRWNS ++ ++R  +LR+   A     + D  +LT +++E+++   S L PF  A  EL   + V+ S V+P
Sbjct:   97 LTTDMWTFMNMDAYLAVMCHFLDDKARLNTVLLGVQSFPQSHTAENIACVKKSMMEEWGISNKVTCVVTDGAPNMVACVRELKLRH---HICVAHTMNLVVKKSLDQHPVLSGIQAKAWKLVGYCRSSTTVKEKLSQVQRHLGLQELKLMQEVETRWNSTYLMLQRLMELREPVGAALAGLQTDIPILTSEEFEIVRGCLSLLIPFYHATVELSAEETVSASKVIP 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19088.5274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI2.990e-6450.21Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE7.850e-6449.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE4.740e-6347.84Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.810e-6249.78Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.090e-5045.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE3.130e-3544.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013B3E2559.570e-2128.38zinc finger BED domain-containing protein 1-like n... [more]
A0A3B1JXH3_ASTMX6.420e-2028.76BED-type domain-containing protein n=1 Tax=Astyana... [more]
UPI001F0881022.340e-1928.09zinc finger BED domain-containing protein 4-like n... [more]
UPI0007425A222.770e-1927.43zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 2..231
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19088contigH-elongata_contig19088:3636..4331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19088.5274.1mRNA_H-elongata_contig19088.5274.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19088 3636..4331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19088.5274.1 ID=prot_H-elongata_contig19088.5274.1|Name=mRNA_H-elongata_contig19088.5274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MLKRQHATVTSDGWTSCSNDTYHSFTASFIEDEFDLPELAMGCKKMNRKT
AGTDLADNVKGLIDSHGMAGRVAAAVTDCEPSMIVCGRELKERDITTHIG
CCNHRFYCTTALVFSGPGVKATMALQQALVTPYTKSSQMADRLEEMCGIL
KVPSLQVVQDVETRWNSRFISVERTRQLRDAIQLHERLDNILLTDDDWEV
LKLIESFLRPFMEAHTELEGAKYVTGSLVVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf