prot_H-elongata_contig190668.5267.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190668.5267.1
Unique Nameprot_H-elongata_contig190668.5267.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: D7G0W5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W5_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.200e-39
Identity = 64/75 (85.33%), Postives = 73/75 (97.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            +V+ALVGPSGGGKSSCI+LLENLY+PSRGQV+LDGLPV++YDH WLHRN+SIVGQEPTL+ARSIRENI YGLEGE
Sbjct:    3 EVLALVGPSGGGKSSCISLLENLYQPSRGQVLLDGLPVHEYDHGWLHRNISIVGQEPTLYARSIRENIIYGLEGE 77          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0B1SHK6_OESDE (ABC transporter domain-containing protein (Fragment) n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1SHK6_OESDE)

HSP 1 Score: 111 bits (278), Expect = 2.180e-30
Identity = 47/77 (61.04%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGETS 81
            +VVALVGPSGGGKSSCIA+LE+ Y+P+ G+V+LDG+P+ +YDH++LH  +++VGQEP L+ARS+ ENI YG++  T+
Sbjct:   12 EVVALVGPSGGGKSSCIAMLEHFYEPTGGEVLLDGVPIREYDHKYLHTKVALVGQEPVLYARSVTENIGYGMDTYTN 88          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: UPI0001EFDF20 (putative ABC transporter, ATP-binding protein n=1 Tax=Trichinella spiralis TaxID=6334 RepID=UPI0001EFDF20)

HSP 1 Score: 119 bits (298), Expect = 1.670e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  598 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 672          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0V1HIK4_TRIPS (ATP-binding cassette sub-family B member 9 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1HIK4_TRIPS)

HSP 1 Score: 119 bits (298), Expect = 1.670e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  619 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 693          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0V0XJ68_TRIPS (ATP-binding cassette sub-family B member 9 n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V0XJ68_TRIPS)

HSP 1 Score: 119 bits (298), Expect = 1.680e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  702 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 776          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0V0W276_9BILA (ATP-binding cassette sub-family B member 9 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V0W276_9BILA)

HSP 1 Score: 119 bits (298), Expect = 1.690e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  945 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 1019          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0V1GTQ8_9BILA (ATP-binding cassette sub-family B member 9 n=4 Tax=Trichinella zimbabwensis TaxID=268475 RepID=A0A0V1GTQ8_9BILA)

HSP 1 Score: 119 bits (298), Expect = 1.690e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  959 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 1033          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A0V1F5Z8_TRIPS (ATP-binding cassette sub-family B member 9 n=7 Tax=Trichinella TaxID=6333 RepID=A0A0V1F5Z8_TRIPS)

HSP 1 Score: 119 bits (298), Expect = 1.690e-29
Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGE 79
            ++VALVGPSGGGKSSCIALLE+ Y+PS GQV+LDG+PV +YDH++ H+ +S+V QEP LFARSIRENI+YGLE +
Sbjct:  966 EMVALVGPSGGGKSSCIALLEHFYEPSSGQVLLDGVPVQEYDHKFFHKKVSLVSQEPVLFARSIRENISYGLEAD 1040          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A158QAX4_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A158QAX4_ENTVE)

HSP 1 Score: 118 bits (296), Expect = 3.100e-29
Identity = 50/76 (65.79%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLEGET 80
            +VVALVGPSGGGKSSCIA+LE+ Y+P RGQV+LDG+P+++YDH++LH  +++VGQEP L++RS+RENI+YG+E  T
Sbjct:  555 EVVALVGPSGGGKSSCIAMLEHFYEPERGQVLLDGVPIHEYDHKFLHTQVALVGQEPVLYSRSVRENISYGVENVT 630          
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Match: A0A3P6TE24_CYLGO (ABC transporter domain-containing protein n=1 Tax=Cylicostephanus goldi TaxID=71465 RepID=A0A3P6TE24_CYLGO)

HSP 1 Score: 111 bits (277), Expect = 4.040e-29
Identity = 47/73 (64.38%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    5 QVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWLHRNMSIVGQEPTLFARSIRENITYGLE 77
            + VALVGPSG GKSSCIALLEN Y+P+ GQV++DG+P+ DY+H ++HR +++VGQEP LFARS+ ENI YG++
Sbjct:   12 ETVALVGPSGSGKSSCIALLENFYQPNAGQVLVDGVPLEDYEHHYIHRKIALVGQEPVLFARSVTENIRYGVD 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190668.5267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W5_ECTSI2.200e-3985.33ABC transporter domain-containing protein n=1 Tax=... [more]
A0A0B1SHK6_OESDE2.180e-3061.04ABC transporter domain-containing protein (Fragmen... [more]
UPI0001EFDF201.670e-2970.67putative ABC transporter, ATP-binding protein n=1 ... [more]
A0A0V1HIK4_TRIPS1.670e-2970.67ATP-binding cassette sub-family B member 9 n=3 Tax... [more]
A0A0V0XJ68_TRIPS1.680e-2970.67ATP-binding cassette sub-family B member 9 n=2 Tax... [more]
A0A0V0W276_9BILA1.690e-2970.67ATP-binding cassette sub-family B member 9 (Fragme... [more]
A0A0V1GTQ8_9BILA1.690e-2970.67ATP-binding cassette sub-family B member 9 n=4 Tax... [more]
A0A0V1F5Z8_TRIPS1.690e-2970.67ATP-binding cassette sub-family B member 9 n=7 Tax... [more]
A0A158QAX4_ENTVE3.100e-2965.79Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
A0A3P6TE24_CYLGO4.040e-2964.38ABC transporter domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 4..71
e-value: 2.0E-14
score: 54.3
NoneNo IPR availableGENE3D3.40.50.300coord: 4..80
e-value: 3.7E-31
score: 109.9
NoneNo IPR availablePANTHERPTHR24221:SF501LP14331Pcoord: 3..77
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 3..77
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190668contigH-elongata_contig190668:203..992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190668.5267.1mRNA_H-elongata_contig190668.5267.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190668 203..992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190668.5267.1 ID=prot_H-elongata_contig190668.5267.1|Name=mRNA_H-elongata_contig190668.5267.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
MVSRQVVALVGPSGGGKSSCIALLENLYKPSRGQVMLDGLPVNDYDHRWL
HRNMSIVGQEPTLFARSIRENITYGLEGETSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR039421Type_I_exporter
IPR027417P-loop_NTPase