prot_H-elongata_contig19063.5261.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19063.5261.1
Unique Nameprot_H-elongata_contig19063.5261.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
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BLAST of mRNA_H-elongata_contig19063.5261.1 vs. uniprot
Match: A0A5D3DSP6_CUCME (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DSP6_CUCME)

HSP 1 Score: 51.2 bits (121), Expect = 1.830e-5
Identity = 31/81 (38.27%), Postives = 40/81 (49.38%), Query Frame = 0 
Query:    2 PWILDSGATGHFTHDGSRLACYAECS--RVLRGAGDKAFPIVGTGSLTLCVRSGEGLVRVKLNDVAHAPGLSHRLLSLRRI 80
            PWILDSGAT HFT        Y  C+    ++ A     PI G G + L     +G     L +V H P LS+ LLS+ +I
Sbjct:  261 PWILDSGATDHFTSFSEHFVTYTSCAGNEKIQIADGSLAPIAGKGQIVLF----DGF---SLQNVLHVPKLSYNLLSISKI 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19063.5261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5D3DSP6_CUCME1.830e-538.27Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19063contigH-elongata_contig19063:6539..6799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19063.5261.1mRNA_H-elongata_contig19063.5261.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19063 6539..6799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19063.5261.1 ID=prot_H-elongata_contig19063.5261.1|Name=mRNA_H-elongata_contig19063.5261.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
EPWILDSGATGHFTHDGSRLACYAECSRVLRGAGDKAFPIVGTGSLTLCV
RSGEGLVRVKLNDVAHAPGLSHRLLSLRRIADAGHTY
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