prot_H-elongata_contig19056.5258.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19056.5258.1
Unique Nameprot_H-elongata_contig19056.5258.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A6H5KR01_9PHAE (Protein arginine N-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR01_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.170e-36
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQ 76
            ARKD FDFVA+PLVHPRF RDALGVSS+REDPLTRSDFLLDSRQWSSLIVGKISEWLDMDS CE SA  SELAFKQ
Sbjct:   26 ARKDHFDFVAIPLVHPRFKRDALGVSSRREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSPCEESAWASELAFKQ 101          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: D8LQH7_ECTSI (Arginine-N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH7_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.660e-36
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQ 76
            ARKD FDFVA+PLVHPRF RDALGVSS+REDPLTRSDFLLDSRQWSSLIVGKISEWLDMDS CE SA  SELAFKQ
Sbjct:   26 ARKDHFDFVAIPLVHPRFKRDALGVSSRREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSPCEESAWASELAFKQ 101          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A836CBK3_9STRA (Protein arginine N-methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBK3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.070e-26
Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQ 76
            AR++ FDFV VPLVHPRF+RDA GVS  R  PLTRSD LLDS+QW SL+VGKISEW+D+DS C  +   SE+AFKQ
Sbjct:   22 ARQEHFDFVCVPLVHPRFSRDARGVSETRSTPLTRSDLLLDSKQWGSLVVGKISEWIDLDSPCADTRRSSEVAFKQ 97          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: K8YS76_NANGC (Protein arginine n (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YS76_NANGC)

HSP 1 Score: 88.6 bits (218), Expect = 1.580e-20
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            AR+ +FDFV +PLVHPRF RD LGVS  R   LTRSD  +DSR W++ +VGK+SEWLD  S  E   L +E   KQ  ++A
Sbjct:   39 ARQSKFDFVTIPLVHPRFERDHLGVSDGRMGTLTRSDMEVDSRTWTTCVVGKVSEWLDPSSPDETVRLAAEAGMKQELAWA 119          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A1S3H7V5_LINUN (Protein arginine N-methyltransferase n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H7V5_LINUN)

HSP 1 Score: 90.1 bits (222), Expect = 3.190e-19
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDAL-GVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            A KD FDFV +P+VHPR+ R+ + G +  R+ PLTRSD LL S  W SLIVGKIS W+D+DS+ E++   SE AF++  +FA
Sbjct:   24 ATKDGFDFVCIPMVHPRYKREFIEGGAKSRQGPLTRSDLLLTSTDWGSLIVGKISPWIDLDSEVESTRKNSEKAFQEELAFA 105          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: W7T6F8_9STRA (Protein arginine N-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6F8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.120e-18
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            AR+ +FDFV +PLVHPRF RD LGVS  R   LTRSD  +DSR W++ +VGK+SEWLD  S  E   L +E   KQ  ++A
Sbjct:   24 ARQSKFDFVTIPLVHPRFERDHLGVSDGRMGTLTRSDMEVDSRTWTTCVVGKVSEWLDPSSPDETVRLAAEAGMKQELAWA 104          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A418FRC4_9STRA (PRMT5_TIM domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FRC4_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.100e-17
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    9 VAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            +A PL HPRF RDA GVS  R  P TRSD +LDSR W+S ++G +S+W+D+DS C+     +E  FKQ  ++A
Sbjct:   13 IAAPLFHPRFRRDANGVSDARNGPQTRSDLVLDSRGWTSSVIGNVSKWIDLDSSCDHVRWTAEAVFKQELAWA 85          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A7S1CPH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPH1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.800e-17
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    6 FDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            F+F+  PLVHPRF RDA+GVS  RE   TRSD  L+S+ W++ +VGK+S WLD+DS   A    S  AFKQ  ++A
Sbjct:   38 FEFITAPLVHPRFRRDAIGVSDAREGEFTRSDLELESKHWTTSVVGKLSPWLDLDSRHAAVRDASVKAFKQEMAWA 113          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A485LAI9_9STRA (Protein arginine N-methyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAI9_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.830e-17
Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    3 KDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            +++   +AVPL HPRF RD  GVS  R+ P TRSD +LDSR W+S ++G +S+W+D DS C+   L +E  FKQ  ++A
Sbjct:   27 EERITIIAVPLFHPRFRRDTSGVSDARDGPQTRSDLVLDSRGWTSSVIGNLSKWIDFDSSCDRVRLTAEQVFKQELAWA 105          
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Match: A0A3R6YA54_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YA54_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.040e-16
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    3 KDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIVGKISEWLDMDSDCEASALGSELAFKQASSFA 81
            +++   +A PL HPRF RDA GVS  R+ P TRSD +LDSR W+S ++G +S+W+D+DS C+     +E  FKQ  ++A
Sbjct:   26 EERITLIAAPLFHPRFRRDANGVSDSRDGPQTRSDLVLDSRGWTSSVIGNVSKWIDLDSICDHVRWTAEAVFKQELAWA 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19056.5258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR01_9PHAE2.170e-3689.47Protein arginine N-methyltransferase n=1 Tax=Ectoc... [more]
D8LQH7_ECTSI2.660e-3689.47Arginine-N-methyltransferase n=1 Tax=Ectocarpus si... [more]
A0A836CBK3_9STRA1.070e-2668.42Protein arginine N-methyltransferase (Fragment) n=... [more]
K8YS76_NANGC1.580e-2054.32Protein arginine n (Fragment) n=1 Tax=Nannochlorop... [more]
A0A1S3H7V5_LINUN3.190e-1953.66Protein arginine N-methyltransferase n=2 Tax=Lingu... [more]
W7T6F8_9STRA1.120e-1854.32Protein arginine N-methyltransferase n=3 Tax=Monod... [more]
A0A418FRC4_9STRA1.100e-1750.68PRMT5_TIM domain-containing protein (Fragment) n=1... [more]
A0A7S1CPH1_9STRA1.800e-1752.63Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A485LAI9_9STRA1.830e-1748.10Protein arginine N-methyltransferase n=1 Tax=Aphan... [more]
A0A3R6YA54_9STRA1.040e-1646.84Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035247PRMT5, TIM barrel domainPFAMPF17285PRMT5_TIMcoord: 6..82
e-value: 3.0E-13
score: 49.6
NoneNo IPR availableGENE3D3.20.20.150coord: 1..82
e-value: 4.4E-20
score: 73.6
IPR007857Protein arginine N-methyltransferase PRMT5PANTHERPTHR10738PROTEIN ARGININE N-METHYLTRANSFERASE 5coord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19056contigH-elongata_contig19056:397..1484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19056.5258.1mRNA_H-elongata_contig19056.5258.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19056 397..1484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19056.5258.1 ID=prot_H-elongata_contig19056.5258.1|Name=mRNA_H-elongata_contig19056.5258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
ARKDQFDFVAVPLVHPRFTRDALGVSSKREDPLTRSDFLLDSRQWSSLIV
GKISEWLDMDSDCEASALGSELAFKQASSFAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035247PRMT5_TIM
IPR007857Arg_MeTrfase_PRMT5