prot_H-elongata_contig189860.5231.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig189860.5231.1
Unique Name	prot_H-elongata_contig189860.5231.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	198

Homology

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: D1GJF9_FUCVE (Chaperonin GroEL, chloroplastic n=50 Tax=Phaeophyceae TaxID=2870 RepID=D1GJF9_FUCVE)

HSP 1 Score: 349 bits (896), Expect = 2.620e-116
Identity = 183/198 (92.42%), Postives = 192/198 (96.97%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M+KKILYQE+ARQALEKGMK+LVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNI NTGVSLIRQAASKTNDVAGDGTTTATVLAY IVKKGMKNVAAGSNPISLKFGLEKATKYLTNQIL+YARPIE+N AI QVATISSGNDKEIG+MIAKALKTVG DGIISLEESNNTF EL+IT+GMRL+KGF
Sbjct:    1 MSKKILYQEEARQALEKGMKVLVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNISNTGVSLIRQAASKTNDVAGDGTTTATVLAYGIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILEYARPIENNMAIEQVATISSGNDKEIGTMIAKALKTVGSDGIISLEESNNTFTELSITQGMRLEKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A141BSB8_9PHAE (Chaperonin GroEL, chloroplastic n=7 Tax=Sargassum TaxID=3015 RepID=A0A141BSB8_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 4.230e-115
Identity = 181/198 (91.41%), Postives = 192/198 (96.97%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M+KKILYQE+ARQALEKGM++LVEAVSVTLGPKGRNVVLDKK+GSPQIINDGVSIAKEIELKDNI NTG+SLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYL NQIL+YARPIEDN AI QVATISSGNDKEIGSMI KALKTVGR+GIISLEESNNT IEL+ITEGM+L+KGF
Sbjct:    1 MSKKILYQEEARQALEKGMRVLVEAVSVTLGPKGRNVVLDKKHGSPQIINDGVSIAKEIELKDNISNTGISLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLINQILEYARPIEDNMAIEQVATISSGNDKEIGSMITKALKTVGREGIISLEESNNTSIELSITEGMKLEKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A1I9LVQ1_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVQ1_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 1.100e-112
Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M+KKILYQE ARQALE GMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIEL+D+IFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPIS+KFGLEKA KYLT+QILDYARPIEDN AI QVATISSGND+E+G MIA ALK VGRDGIISLEESN TFI++AI++GMRLDKGF
Sbjct:    1 MSKKILYQEQARQALENGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELEDSIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISIKFGLEKAAKYLTSQILDYARPIEDNKAIRQVATISSGNDQELGFMIAHALKCVGRDGIISLEESNTTFIDIAISDGMRLDKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A2I4Q2B6_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2B6_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 4.550e-112
Identity = 179/198 (90.40%), Postives = 185/198 (93.43%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M KKILYQ+ ARQALEKGM+ILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIEL DNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLK GLEK TKYL NQIL+Y+RPIEDN +I QVATISSGNDKEIG MIA+AL  VGRDGIISLEESNNTF EL ITEGMRLDKGF
Sbjct:    1 MCKKILYQDHARQALEKGMQILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELSDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKVGLEKGTKYLINQILEYSRPIEDNKSIMQVATISSGNDKEIGKMIAEALNIVGRDGIISLEESNNTFTELNITEGMRLDKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A8E5XRF2_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF2_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 9.580e-103
Identity = 167/197 (84.77%), Postives = 181/197 (91.88%), Query Frame = 0

Query:    2 TKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            +KKILYQE+AR+ALE+GM+ L EAVSVTLGP+GRNVVLDKKYGSPQIINDGVSIAKEIELK+ I NTGVSLIRQAA+KTNDVAGDGTTTATVLAYA+VKKGMKNVAAGSN ISLK GLEKAT YLT QI + ARPI+D+ AI QVATISSGNDKEIGSMIA ALKT+GRDGIISLEE  NTFIEL ITEGMRL+KGF
Sbjct:    3 SKKILYQENARRALEEGMQKLAEAVSVTLGPRGRNVVLDKKYGSPQIINDGVSIAKEIELKNTIQNTGVSLIRQAAAKTNDVAGDGTTTATVLAYAMVKKGMKNVAAGSNSISLKIGLEKATHYLTTQIFESARPIKDSKAIEQVATISSGNDKEIGSMIALALKTIGRDGIISLEEGTNTFIELTITEGMRLEKGF 199

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: B7T225_VAULI (Chaperonin GroEL, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T225_VAULI)

HSP 1 Score: 302 bits (773), Expect = 8.660e-98
Identity = 156/198 (78.79%), Postives = 177/198 (89.39%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            MTKKILYQE ARQALE+GM+I+ EAV+VTLGPKGRNVVL+KKYG PQIINDGV+IAKE+EL D I NTGVSL+RQAASKTNDVAGDGTTTATVLAYAIV +GMKNVAAG+NPIS+K G+EKATKYLTNQIL+ +RPIE+N AI Q+A+IS+GND EIG+MIA AL+ VGRDGIISLEE  +   EL ITEGMR DKGF
Sbjct:    1 MTKKILYQEKARQALERGMEIMAEAVAVTLGPKGRNVVLEKKYGGPQIINDGVTIAKEVELSDRIENTGVSLLRQAASKTNDVAGDGTTTATVLAYAIVNQGMKNVAAGANPISVKIGIEKATKYLTNQILNCSRPIENNKAIIQIASISAGNDSEIGNMIADALEQVGRDGIISLEEGTSISTELEITEGMRFDKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A8F0F7H1_9PHAE (Chaperonin GroEL n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7H1_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 6.270e-97
Identity = 159/180 (88.33%), Postives = 166/180 (92.22%), Query Frame = 0

Query:   19 MKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M IL EAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTN+VAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYL NQIL+ + PI    +I QVA+IS+GND +IGSMIAKAL  VGRDGIISLEESNNTF ELAITEGMRLDKGF
Sbjct:    1 MNILAEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNEVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLINQILEMSSPIVTLLSIEQVASISAGNDPQIGSMIAKALNIVGRDGIISLEESNNTFTELAITEGMRLDKGF 180

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: J9QT03_9STRA (Chaperonin GroEL n=2 Tax=Pelagomonas TaxID=35676 RepID=J9QT03_9STRA)

HSP 1 Score: 290 bits (742), Expect = 4.080e-93
Identity = 145/198 (73.23%), Postives = 180/198 (90.91%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M+KKILYQ++AR+ALEKGMKI+VEAV+VTLGP+GRNVVL+K+YGSPQI+NDGV+IAKEIEL+D + NTGVSLIRQAASKTNDVAGDGTTT+TVLAYAIV++GMKNVAAG+NPI+LK G+EKAT+Y+  QI ++A+PIE+  +IAQV ++S+GND  +G+MIA AL+ VGRDGIISLEE  +TF EL +TEGMR +KGF
Sbjct:    1 MSKKILYQDNARKALEKGMKIMVEAVAVTLGPRGRNVVLEKQYGSPQIVNDGVTIAKEIELEDPVENTGVSLIRQAASKTNDVAGDGTTTSTVLAYAIVQEGMKNVAAGANPITLKIGIEKATRYIIEQINEFAQPIENMESIAQVGSVSAGNDTAVGNMIADALEKVGRDGIISLEEGKSTFTELEVTEGMRFEKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: A0A0K9NL70_ZOSMR (Uncharacterized protein (Fragment) n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NL70_ZOSMR)

HSP 1 Score: 279 bits (713), Expect = 5.340e-93
Identity = 143/198 (72.22%), Postives = 174/198 (87.88%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M KKILYQ++AR+ALEKGM+I+VEAVSVTLGPKGRNVVL+K YGSPQI+NDGV+IAKEI+L D++ NTGVSLIRQAASKTNDVAGDGTTTATVLAYA+VK+G+KNVAAG+NPIS+K G+EKA +YL  QI ++A+ +E+  +I QVATISSGND+ IGS+IA AL  VG++GIISLEE      +L ITEGM+L+KGF
Sbjct:    1 MAKKILYQDNARKALEKGMEIMVEAVSVTLGPKGRNVVLEKSYGSPQIVNDGVTIAKEIKLPDHVQNTGVSLIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGMEKAVQYLVTQINEFAQSVEEVESIQQVATISSGNDEIIGSLIANALSKVGKEGIISLEEGKGIRTDLEITEGMKLEKGF 198

[Close]

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Match: B3FNQ8_9CRYP (GroEL (Fragment) n=1 Tax=Rhodomonas sp. CCMP1178 TaxID=354588 RepID=B3FNQ8_9CRYP)

HSP 1 Score: 283 bits (724), Expect = 8.420e-92
Identity = 142/198 (71.72%), Postives = 177/198 (89.39%), Query Frame = 0

Query:    1 MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIINDGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVKKGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATISSGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF 198
            M+K ILYQEDAR+ALE+GM IL EAVSVTLGPKGRNVVL++KYGSPQI+NDGV+IAKEIEL+D+I NTGV+LIRQAASKTNDVAGDGTTTATVLA+A+VK+GMKNVAAG+NPI++K G+EKAT+++ +QI +Y+RP+ED  +I QVA+IS+GND E+G MIA A++ VGR+G+ISLEE  +T  EL +TEGM  +KGF
Sbjct:    1 MSKIILYQEDARRALERGMDILAEAVSVTLGPKGRNVVLERKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAMVKQGMKNVAAGANPIAIKRGIEKATQFVISQIAEYSRPVEDTKSITQVASISAGNDLEVGQMIADAIEKVGREGVISLEEGKSTITELELTEGMCFEKGF 198

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot

BLAST of mRNA_H-elongata_contig189860.5231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1GJF9_FUCVE	2.620e-116	92.42	Chaperonin GroEL, chloroplastic n=50 Tax=Phaeophyc...	[more]
A0A141BSB8_9PHAE	4.230e-115	91.41	Chaperonin GroEL, chloroplastic n=7 Tax=Sargassum ...	[more]
A0A1I9LVQ1_9PHAE	1.100e-112	89.90	Chaperonin GroEL, chloroplastic n=1 Tax=Pleuroclad...	[more]
A0A2I4Q2B6_9PHAE	4.550e-112	90.40	Chaperonin GroEL, chloroplastic n=1 Tax=Dictyopter...	[more]
A0A8E5XRF2_9PHAE	9.580e-103	84.77	Chaperonin GroEL, chloroplastic n=1 Tax=Ishige oka...	[more]
B7T225_VAULI	8.660e-98	78.79	Chaperonin GroEL, chloroplastic n=1 Tax=Vaucheria ...	[more]
A0A8F0F7H1_9PHAE	6.270e-97	88.33	Chaperonin GroEL n=1 Tax=Protohalopteris sp. TaxID...	[more]
J9QT03_9STRA	4.080e-93	73.23	Chaperonin GroEL n=2 Tax=Pelagomonas TaxID=35676 R...	[more]
A0A0K9NL70_ZOSMR	5.340e-93	72.22	Uncharacterized protein (Fragment) n=1 Tax=Zostera...	[more]
B3FNQ8_9CRYP	8.420e-92	71.72	GroEL (Fragment) n=1 Tax=Rhodomonas sp. CCMP1178 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 80..99 score: 64.75 coord: 24..40 score: 62.41 coord: 46..64 score: 51.11
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 23..198 e-value: 1.2E-36 score: 126.4
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 1..193 e-value: 5.4E-50 score: 171.7
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 1..195
None	No IPR available	PANTHER	PTHR45633	FAMILY NOT NAMED	coord: 1..198
None	No IPR available	PANTHER	PTHR45633:SF4		coord: 1..198

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig189860	contig	H-elongata_contig189860:600..1193 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig189860.5231.1	mRNA_H-elongata_contig189860.5231.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig189860 600..1193 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig189860.5231.1 ID=prot_H-elongata_contig189860.5231.1|Name=mRNA_H-elongata_contig189860.5231.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MTKKILYQEDARQALEKGMKILVEAVSVTLGPKGRNVVLDKKYGSPQIIN
DGVSIAKEIELKDNIFNTGVSLIRQAASKTNDVAGDGTTTATVLAYAIVK
KGMKNVAAGSNPISLKFGLEKATKYLTNQILDYARPIEDNTAIAQVATIS
SGNDKEIGSMIAKALKTVGRDGIISLEESNNTFIELAITEGMRLDKGF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR002423	Cpn60/TCP-1
IPR027413	GROEL-like_equatorial_sf