prot_H-elongata_contig1895.5209.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1895.5209.1
Unique Nameprot_H-elongata_contig1895.5209.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length367
Homology
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: D8LF60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF60_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 3.340e-114
Identity = 167/286 (58.39%), Postives = 201/286 (70.28%), Query Frame = 0
Query:   82 ALLLDFFLVGAQFTLGIVMYSRTLPDFSEALKLDCLLKVPVTYTEDECLEYIRSDRYAGMMLVWRSYNYLSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRVGFRTNKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIFSGCCMFWKRAYTDPVPAYENMHPPWDPFKDKGPLNDHKNATEVRAGDEDG-TVKLDPLGLFIVGEMQETDHRKIMPI 366
            ALLLDFFL G Q TLG  MYSRTLP++ E+ +LDCLLK PV  + D+CL YIRSDRYAGMMLVWRSY YLSLDYTKYY+RLVT EQD VCCGFGPP RCT D+R+FP + ++N+VGF T++RYVCG                       EIGGCKYDYPMG CM +DVD      RGCA  +E HMT+K+I HA  IMGLS+L+ AS+ SGCCMFWKRAY D +P + + H PWDPFK+K  L ++K     RAG E G    LDPLG+ I+G+M   +  KI+P+
Sbjct:    2 ALLLDFFLAGIQLTLGGTMYSRTLPEYDESFQLDCLLKEPVVNSPDDCLGYIRSDRYAGMMLVWRSYVYLSLDYTKYYQRLVTIEQDGVCCGFGPPTRCTGDARDFPSYFSENQVGFGTDRRYVCGA----------------------EIGGCKYDYPMGQCMDIDVDVLEGA-RGCAFELEMHMTNKVIVHAFFIMGLSALMFASMLSGCCMFWKRAYDDSMPDHVDSHVPWDPFKNKDLLGENKGTKSKRAGREGGPAATLDPLGVLIMGKMPGVNEGKIIPM 264          
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: A0A7S3XM71_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM71_HETAK)

HSP 1 Score: 181 bits (459), Expect = 3.480e-50
Identity = 102/318 (32.08%), Postives = 154/318 (48.43%), Query Frame = 0
Query:    6 NLELFSKALHRIRCMVSLYFFVAGCIVVGNIHLSQAFGRGMTAIGSFLIVCCFVNSVAASIMYAGVKRHNKCIILAALLLDFFLVGAQFTLGIVMYSRTLPDFSEALKLDCLLKVPVTYTEDECLEYIRSDRYAGMMLVWRSY-NYLSLDYTK--YYRRLVTFEQDDVCCGFGPPMRCTDDSREFP-RWANQNRVGFRTNKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIFSGCCMFWKRAYTDPVPAYENMHPPWDPFK 319
            +L+L   AL  +R  V  Y F+ GC+   N H  QA G  M  +GS L +   +        + G + HNK I+     +D  ++  Q  L  ++ ++  P +S   +  C+           C  Y   DR AG  LVW SY        TK  Y++R+VT +   +CCGFG PM C +D+R FP    + N     T +R +CG  E +Y  + +C  YV+  A   E+ GC YDY +GDC   DV+  A   RGCA  +E +++  +   A  ++GL+     ++   CCM WK+   D +P Y    PP DP++
Sbjct:    8 DLQLNFVALSALRVFVYFYIFIVGCVYADNDHAKQALGSDMIGLGSGLAILAIIELCNTPTGWFGSRHHNKFILTTYFCVDAVVLPLQLLLAALLLAQAFPKYSYDFQNACMTYNGAGTDYAACSAYYLDDRTAGWRLVWLSYYQRAQAAATKGTYFKRIVTLQSTGLCCGFGRPMHCEEDTRSFPSELVSGNVWDAYTAQRVLCGPSESYYPNTSYCEHYVNPAAANLEVAGCYYDYTLGDCTTADVEDGA---RGCAATLEEYVSGWVRVQAAIVLGLTVFQATAMCMACCMCWKKREDDVLPGYM-QEPPADPYR 321          
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: A0A835Z288_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z288_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.720e-32
Identity = 75/219 (34.25%), Postives = 104/219 (47.49%), Query Frame = 0
Query:   93 QFTLGIVMYSRTLPDFSEALKLDCLLKVPVTYTEDE-CLEYIRSDRYAGMMLVWRSYNYLSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRV----GFRTNKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIFSGCCMFWKRAYTDPVP 306
            Q   G+ + S   PD   A +  CLL    T      C  Y RS+RYA M+ VWRSYNYLS   ++YY      E+D  CCGFG P  C  D+R FP    + ++     + ++ RYVCG    WY E+Y+CSQ VDE+A+ P +GGC                      GC   ++  M  +I   A +I+ L  +  A +    C+  KR   D +P
Sbjct:    2 QIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYARMLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAAPTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCS---------------------GCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLP 199          
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: K3W9V6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9V6_GLOUD)

HSP 1 Score: 132 bits (331), Expect = 4.920e-32
Identity = 88/296 (29.73%), Postives = 145/296 (48.99%), Query Frame = 0
Query:   22 SLYFFVAGCIVVGNIHLSQAFGRGMTAIGSFLIVCCFVNSVAASIMYAGVKRHNKCIILAALLLDFFLVGAQFTLGIVMYSRTLPDFSEALKLDCL---LKVPVTYTED-ECLEYIRSDRYAGMMLVWRSYNYLSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRVGFRTNKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKI----IYHAISIMGLSSLLLASIFSGCCMFWKRAYTDPVPAYE 309
            +L   + G + V N H  Q  G  +  +G  LI    +  +AA + Y G + HNKC++L   +L   L+  Q   G V   +++P  +  +++ CL   L   +T  +  EC +++ SD +AGM LVW+SY   S+    Y   ++ F++++ CCG G P RC++D+R FP       +  +  +R  C        +SY    Y   T      G C+YD P G C    ++  A TTRGC   +   ++ ++    I   +S+M   SLL+AS+    C+ +KR   D +P+ E
Sbjct:   22 TLLLIILGALFVSNEHYHQLLGNTIKHVGGGLIFTGLLYLLAAVLGYYGARTHNKCLLLMLFVLLAVLLFLQTVFGSVALGKSIPSLAHEMQVACLTLGLYDSMTVKQQQECDQFLHSDGFAGMTLVWQSYYTNSITKGSYRAMVLNFQKENFCCGNGLPSRCSNDTRAFPASYPSTTISTKVRQRITC--------DSYGTMAYA-ATRECNTNGRCEYDLPYGSC---GLNPVATTTRGCGAFVLAKLSTQVEAIGIIVLVSLMFPISLLVASL----CLCFKRRDEDVLPSIE 301          
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: A0A1W0A853_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A853_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.000e-18
Identity = 73/302 (24.17%), Postives = 129/302 (42.72%), Query Frame = 0
Query:   19 CMVSLYFFVAGCIVVGNIHLSQAFGRGMTAIGSFLIVCCFVNSVAASIMYAGVKRHNKCIILAALLLDFFLVGAQFTLGIVMYSRTLPDFSEALKLDCLLKVPVTYTED--ECLEYIRSDRYAGMMLVWRSYNYLSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRVGFRTNKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIF----SGC---CMFWKRAYTDPVPAYENM 311
            C+++L+ F+ G ++  + H   A G+   A+    I       + A   Y G +  NK ++L  L+    L   Q    +     T+PD+S A +  CL    +       +C  Y +S+ Y  +   WRSY   ++        +   +   +CCGFGPP  C +D+   P  ++ N       + Y+       Y ++ FC  Y+D        G C +D P+G C     +     ++GCA A         +YHA ++  +  ++L S+F     GC   C+ +KR   D +P  +++
Sbjct:   21 CILALFLFIVGVVMSQSTHYILALGKQFAAVAGGFIFIGICYGLIAIFAYCGGRHQNKFLLLVHLVGVGLLSSFQGLTALSGLLLTIPDYSYAFQETCLTNYYLNNATLLLQCTPYFQSEMYNNLRASWRSYYSDNVADPTQSTGIQRLQDTSICCGFGPPNHCMNDTN--PLSSSDNTPHQICPRNYI-----NLYPKTPFC--YLD--------GACSFDEPIGTC---GANGAGKLSKGCASAFH-------LYHASTLQSICVVVLISLFIPSLGGCNTICLCFKRKNEDVIPTSQHI 295          
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Match: A0A6G0X9I7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9I7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.870e-16
Identity = 74/284 (26.06%), Postives = 118/284 (41.55%), Query Frame = 0
Query:   29 GCIVVGNIHLSQAFGRGMTAIGSFLIVCCFVNSVAASIMYAGVKRHNKCIILAALLLDFFLVGAQFTLGIVMYSRTLPDFSEALKLDCLLKVPVTYTE-----DECLEYIRSDRYAGMMLVWRSYNYLSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRVGFRTNKRYVCGQVEMW-YEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVDARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIFSGCCMFWKRAYTDPVP 306
            G  +  + H   A G  +  +G F+ +  F   VAA+  Y G K HNK ++         L   Q  +       +LPD   A +  CL     +Y +     D+C +Y  SD + G+ L WR++   SL        + + E D++CCG GPP  C +D+R FP     NR      ++ +C   +   Y  +  C  YV         G C++D P+G C    +       +GCA A+       +    I++     L +    S  C+ +KR   D +P
Sbjct:   34 GSGLASSYHYKMALGPVVQNVG-FIFISLFYP-VAAAFGYYGAKYHNKFLLAVHFAGVIALAVMQMLIATSGLVGSLPDTPYATQEACLTN---SYLDNQTQLDQCRDYFLSDEFGGLRLSWRTFYEESLVDVTAGAGMQSLEDDNICCGLGPPRHCMNDTRPFP----SNRPSSSWTEQQLCPSSKGGNYPTTPLC--YVG--------GSCQFDMPIGSC---GMSGAGPQGKGCAKALHQSFATTVQALCITVQIFLFLPITFACSTVCLMFKRKQEDVLP 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1895.5209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LF60_ECTSI3.340e-11458.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XM71_HETAK3.480e-5032.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z288_9STRA4.720e-3234.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3W9V6_GLOUD4.920e-3229.73Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1W0A853_9STRA1.000e-1824.17Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6G0X9I7_9STRA1.870e-1626.06Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..366
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 271..293
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1895contigH-elongata_contig1895:297..4173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1895.5209.1mRNA_H-elongata_contig1895.5209.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1895 297..4173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1895.5209.1 ID=prot_H-elongata_contig1895.5209.1|Name=mRNA_H-elongata_contig1895.5209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=367bp
QCTQENLELFSKALHRIRCMVSLYFFVAGCIVVGNIHLSQAFGRGMTAIG
SFLIVCCFVNSVAASIMYAGVKRHNKCIILAALLLDFFLVGAQFTLGIVM
YSRTLPDFSEALKLDCLLKVPVTYTEDECLEYIRSDRYAGMMLVWRSYNY
LSLDYTKYYRRLVTFEQDDVCCGFGPPMRCTDDSREFPRWANQNRVGFRT
NKRYVCGQVEMWYEESYFCSQYVDETAIFPEIGGCKYDYPMGDCMGVDVD
ARAATTRGCALAMETHMTDKIIYHAISIMGLSSLLLASIFSGCCMFWKRA
YTDPVPAYENMHPPWDPFKDKGPLNDHKNATEVRAGDEDGTVKLDPLGLF
IVGEMQETDHRKIMPI*
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