prot_H-elongata_contig18947.5207.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18947.5207.1
Unique Nameprot_H-elongata_contig18947.5207.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.080e-57
Identity = 93/137 (67.88%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    9 RDQKIAPLSALNPDTVYSAKEWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLXXXXXXXXXXXXXXXXRGDGRAVPRELDKKTGDA--VDLRLEEIGMSGVRQ 143
            RD+ IAPL A+N DT++SA EW+AGVAGGSVGV+GTLIQLELKQEKL++RRNCPYC+GSGKLVCA+C SAG  T KLPG++T STL                RGDGRAVPRELD+KT DA  VDLRLEEIGM G+ Q
Sbjct:   99 RDRTIAPLRAINQDTLFSANEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNCRGDGRAVPRELDRKTADAAEVDLRLEEIGMGGIGQ 235          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A835YP24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP24_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.230e-17
Identity = 44/107 (41.12%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   32 AGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLXXXXXXXXXXXXXXXXRGDGRAVPRELDKKTGDAVDLRLEEIGM 138
            AG+ GGSVGV+GTL+ +E K+  +R    C YC GSG LVC  C   G LT        S +L                +GDGR+VP  L++KT    +  LEEIGM
Sbjct:   19 AGILGGSVGVIGTLLGIEWKKYNVRQASECCYCRGSGHLVCGQCLGTGELTLVNAVTNKSISLGCPTCSGMTYITCINCKGDGRSVPNFLNRKTSRDPEDELEEIGM 125          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 9.570e-15
Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    9 RDQKIAPLSALNPDTVYSAKEWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKL--PGAETSSTLXXXXXXXXXXXXXXXXRGDGRAVPRELDKK 124
            R ++ + L AL+P  + +  E ++G AGG+VGVMGTLI LELK++ +  R  CPYC G+G L CA C   GIL  +    GA    ++    XXXXXXXXXXXX  DG +VP  L+ K
Sbjct:   61 RRRRSSELRALDPAYIDAVNELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGILLARRRSDGAAAPLSVPCGCXXXXXXXXXXXXXXDGASVPPLLEYK 178          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A7R9U8V3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.840e-13
Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   15 PLSALNPDTVYSAKEWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLXXXXXXXXXXXXXXXXRGDG--RAVPRELDKKTGDAVDLRLEEIGMS 139
            P   L    V +A +     AGG+VGVMG+L+ +E+++ + R R  CPYC G+G+L CA+C  AG    ++ GA+ S T+   XXXXXXXXXXXXX      R VP  LD++     +  LEEIG++
Sbjct:   32 PTMTLEGLVVNTAGDVACAFAGGTVGVMGSLVAIEIRKLQQRKRNACPYCVGTGRLTCAVCWGAG--KVEIAGAQGSQTVVVDXXXXXXXXXXXXXXXXXXXRLVPLMLDRRASRDPEDELEEIGLA 156          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR)

HSP 1 Score: 71.2 bits (173), Expect = 3.230e-12
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   29 EWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLXXXXXXXXXXXXXXXXRGDGRAVPRELDKKTGDAVDLRLEEIGMSGV 141
            E  A +AGG+VGVMGT+I LE+++++++ R+ CPYC G+GKL CA C + G +     G   S+                  +GDGR +P   ++    A+  + E+   + +
Sbjct:  122 EITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATCYTVGAVPC---GDALSAQTGCAVCNERGFLECNHCQGDGRLIPWVYER----AISAQYEDYTYTAI 227          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 1.420e-11
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   29 EWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLXXXXXXXXXXXXXXXXRGDGRAVPRELDKKTGDAVDLRLEEIGMSGV 141
            E  A +AGG+VGVMGT+I LEL++++++ R+ CPYC G+GKL CA C + G + ++   A T+  +                 GDGR +P   ++    A+  + E+   + +
Sbjct:   68 EITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASCYTIGAVPSRT--ALTAQEVCTCCNERGFLQCNHCD-GDGRLIPLAYER----AIRAQYEDYVYTAI 173          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UXZ1_CYAM1)

HSP 1 Score: 67.0 bits (162), Expect = 6.290e-11
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   28 KEWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTK 84
            +E  +  AGGS+GV+GTL+ LEL Q + R R  CPYC+G GKLVC  C + G L  +
Sbjct:   85 QELASAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGTLPNR 141          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A7R9UFV6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFV6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.790e-9
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 MRYLQSVGRDQKIAPLSALNPDTVYSA---KEW---LAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAE 89
            +R+  S  R +  A   +L+ D    A   K W   +AG+ GGS+GV+GTL+  E ++ K+  R  CPYC GSG L CA+C  A  L  + PGAE
Sbjct:   37 VRFSGSSRRQRDSAWRRSLHIDPYLIAEQSKTWQGDIAGLLGGSIGVIGTLVYYEKRRFKMLERVLCPYCQGSGFLTCAVCHGAESLQVR-PGAE 130          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 1.190e-7
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   32 AGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSS 92
            A  AGG+VGVMG+LI  EL+Q + +  + CPYC G+G+L C  C   G L     GA+  +
Sbjct:   28 AAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLISEVGAQAKA 88          
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU)

HSP 1 Score: 57.4 bits (137), Expect = 1.580e-7
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   21 PDTVYSAKEWLAGVAGGSVGVMGTLIQLELKQEKLRSRRNCPYCNGSGKLVCAMCCSAGIL 81
            P TV    E  + +AGG+VGVMGTL+ LE+ ++++   R CPYC G  KL C +C   G +
Sbjct:   47 PPTV---NEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLCYGMGFI 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18947.5207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LRQ7_ECTSI1.080e-5767.88DnaJ Cysteine-Rich Domain-Containing Protein n=2 T... [more]
A0A835YP24_9STRA1.230e-1741.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YW14_9STRA9.570e-1547.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U8V3_9STRA3.840e-1343.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
R7QE93_CHOCR3.230e-1231.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J075_9FLOR1.420e-1132.74Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracila... [more]
M1UXZ1_CYAM16.290e-1150.88Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7R9UFV6_9STRA5.790e-941.05Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TK16_9RHOD1.190e-744.26Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2Y0D2_GALSU1.580e-744.26Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852FAMILY NOT NAMEDcoord: 49..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..50
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 54..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18947contigH-elongata_contig18947:5023..6317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18947.5207.1mRNA_H-elongata_contig18947.5207.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18947 3377..6357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18947.5207.1 ID=prot_H-elongata_contig18947.5207.1|Name=mRNA_H-elongata_contig18947.5207.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MRYLQSVGRDQKIAPLSALNPDTVYSAKEWLAGVAGGSVGVMGTLIQLEL
KQEKLRSRRNCPYCNGSGKLVCAMCCSAGILTTKLPGAETSSTLQCPGCS
GKRYITCLNCRGDGRAVPRELDKKTGDAVDLRLEEIGMSGVRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf