prot_H-elongata_contig188951.5187.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188951.5187.1
Unique Nameprot_H-elongata_contig188951.5187.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 130 bits (326), Expect = 5.230e-32
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVG 152
            + EA  S+EWP+WK+ IA+EM+   + G + +VE PK   ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P    ASIR++L++ A   WE  Q+DV  AYL  D+E EIY+  P    +  K+  V  LK+ +YGL   G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 129 bits (323), Expect = 1.320e-31
Identity = 61/155 (39.35%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW 155
            + EAQAS EWP+W+K +  E +     G W++ + PK +  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++ EIY+  PE + D   ++  L+K +YGL   G  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 124 bits (312), Expect = 2.880e-30
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVG 152
            + EA  S+EWP+WK+ I +EM+   + G + +VE PK   ++G++ VF+ K + +  IE YK RLVAQGF QV GI + E+ +P    ASI ++L++ A   WE  Q+DV  AYL  D+E EIY++ P    +  K+  V  LK+ +YGL   G
Sbjct:  115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSG 268          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 122 bits (307), Expect = 9.490e-30
Identity = 59/149 (39.60%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    7 SSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW 155
            S+EW QWK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E+ +P     ++R+V+S+  ALG     +D+  AYL   +  E+Y++ P  Y D   +V LL++A+YGL   G  W
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 182          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 123 bits (309), Expect = 9.590e-30
Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 0
Query:    3 EAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW 155
            EAQAS +WPQW++ I  EME   A G + +V +P G  V+G+++VF RK + +G + + K R+VAQGF Q+ GI + E+ +P    +S+R+++++ A  GW   QLDV  AYL  D++ EIY+  P     + ++  V  LKK++YGL   G  W
Sbjct:  327 EAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAW 481          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A177VSQ5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VSQ5_9BASI)

HSP 1 Score: 122 bits (307), Expect = 1.860e-29
Identity = 59/149 (39.60%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    7 SSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW 155
            S+EW QWK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E+ +P     ++R+V+S+  ALG     +D+  AYL   +  E+Y++ P  Y D   +V LL++A+YGL   G  W
Sbjct:  703 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 851          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 122 bits (307), Expect = 1.870e-29
Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 0
Query:    3 EAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW 155
            EA+   +WP W+  I +E+   +  G W + + P G+  +G++ VFK K+  DG ++KYK RLVAQGF Q  G+ Y+E+ +P    A++R+++++ A  GW A Q+DV  AYL  ++E EIY+  P  Y +  K V  L KA+YGL   G  W
Sbjct:  835 EAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTW 986          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 114 bits (285), Expect = 4.140e-29
Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 0
Query:   13 WKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAY--------CDSRKQVGLLKKAMYGLVHVGLLW 155
            WKK +  E         W +V+RP+GKTV+G+R VF+ K+  DG +E+ K RLVA+GF Q+ G HY E+ +     +SIR V+++ A    E  QLD   AYL  ++E EIY+E+P+           D   +V  ++KA+YGL   G +W
Sbjct:   32 WKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 121 bits (304), Expect = 4.770e-29
Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    3 EAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW 155
            EA  S +WPQW+K I +EM        + +VE P+   V+G++ VF+ K + +G+IE YK RLVAQGF Q+ GI + ++ +P    ASIR++L++ A   W+  Q+DV  AYL AD+E EI+++ P       K+  V LL+ A+YGL   G  W
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQW 1119          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A177U2V9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U2V9_9BASI)

HSP 1 Score: 121 bits (303), Expect = 5.940e-29
Identity = 59/149 (39.60%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    7 SSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW 155
            S EW QWK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E+ +P     ++R+V+S+  ALG     +D+  AYL   +  E+Y++ P  Y D   +V LL++A+YGL   G  W
Sbjct:  232 SVEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLRQAGRAW 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GN13_9APHY5.230e-3243.51Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A401GYH9_9APHY1.320e-3139.35Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GP19_9APHY2.880e-3041.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U0B1_9BASI9.490e-3039.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5K1K0E1_9APHY9.590e-3040.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VSQ5_9BASI1.860e-2939.60Integrase catalytic domain-containing protein n=1 ... [more]
A0A5C3E5T1_9BASI1.870e-2939.87Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A0A9Y7J8_LYGHE4.140e-2939.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GQU1_9APHY4.770e-2941.29Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A177U2V9_9BASI5.940e-2939.60Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 4.6E-31
score: 108.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 6..148
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188951contigH-elongata_contig188951:681..1148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188951.5187.1mRNA_H-elongata_contig188951.5187.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188951 157..1193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188951.5187.1 ID=prot_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAA
LGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVH
VGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like