prot_H-elongata_contig188904.5185.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188904.5185.1
Unique Nameprot_H-elongata_contig188904.5185.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: D8LNN8_ECTSI (Eukaryotic translation initiation factor 3 subunit D n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.400e-58
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0
Query:    2 QVVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKVQG 108
            QVVEEFELPQLTKLQTNIPK ED++WCGFLEQYD+QYDRI+++TERRLQRCEKKEFYYVTTTDDPV+EKLA E KGNVFATD ILAHLMASPRTIYPWDIV QKV G
Sbjct:  192 QVVEEFELPQLTKLQTNIPKAEDIQWCGFLEQYDDQYDRITSRTERRLQRCEKKEFYYVTTTDDPVMEKLAVEGKGNVFATDAILAHLMASPRTIYPWDIVVQKVNG 298          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A6U1Q148_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q148_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.870e-47
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            VVEEF+L QLTKLQ N P  ED+ WCG +EQYD+ YDR++T+TER+L+RCE KEFYYVTTTDDPVIEKLA E  GNVFATD ILAHLMASPR++YPWD+V QK+
Sbjct:  216 VVEEFDLAQLTKLQANAPSAEDLMWCGSIEQYDDVYDRVTTRTERKLERCENKEFYYVTTTDDPVIEKLAVENAGNVFATDAILAHLMASPRSVYPWDLVVQKL 319          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A0P6GGR6_9CRUS (Eukaryotic translation initiation factor 3 subunit p66 (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6GGR6_9CRUS)

HSP 1 Score: 143 bits (361), Expect = 5.400e-40
Identity = 62/104 (59.62%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            ++E+FEL QLT+LQ NIP  +D++WCG L++YD  +DR+++KT+RR+ R + ++FYYVTTTDDPVIE+LA   + NVFATD ILAHLMA+ R+++PWDIV Q+V
Sbjct:   25 IIEQFELNQLTRLQANIPDADDLRWCGSLQEYDPVFDRVTSKTDRRITRYDDRDFYYVTTTDDPVIEELATSGEANVFATDAILAHLMAATRSVFPWDIVVQRV 128          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A835Z0I8_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.980e-38
Identity = 67/109 (61.47%), Postives = 87/109 (79.82%), Query Frame = 0
Query:    2 QVVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGE--EKGNVFATDTILAHLMASPRTIYPWDIVAQKVQG 108
            QV+EE +LP LTKL T +P V D++WCGFL+QYDE YD ++++  +RL+R E KEFY+VTTTDDPVIE+L  E    G VFATD IL+HLMA+PR+++PWD+V QKV G
Sbjct:  184 QVLEELDLPALTKLTTAVPTVTDLQWCGFLDQYDESYDTLTSRNPKRLRRHENKEFYFVTTTDDPVIERLTTELENAGAVFATDAILSHLMAAPRSVFPWDVVIQKVNG 292          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: K3XBY3_GLOUD (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBY3_GLOUD)

HSP 1 Score: 144 bits (363), Expect = 2.410e-38
Identity = 65/104 (62.50%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            ++E+FEL QLTKLQ NIP VED+KWCG L +YD  +DR+++K+  R++R + ++FYYVTTTDDPVIE+LA + + NVFATD ILAHLMAS R+++PWDIV Q+V
Sbjct:  183 ILEQFELQQLTKLQANIPNVEDIKWCGSLLEYDNSFDRVTSKSNLRVRRYDDRDFYYVTTTDDPVIEELATKGEANVFATDAILAHLMASSRSVFPWDIVVQRV 286          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A7S2CZZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZZ7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.110e-37
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    2 QVVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGE----EKG--NVFATDTILAHLMASPRTIYPWDIVAQKVQG 108
            +V+EE +LPQ  KLQ N P  ED+KWCG L+ Y+E YDRI++KT + LQR E KEFYYV+TTDDP+IE++A E    E+G   V+ATD ILAHLMAS R++YPWDIV QK+ G
Sbjct:   24 EVLEELDLPQFNKLQANKPTAEDLKWCGHLDAYNEAYDRITSKTPKPLQRIENKEFYYVSTTDDPIIEQIAVEAGEAEEGVTRVYATDAILAHLMASSRSVYPWDIVVQKMGG 136          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A7S1BPB9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPB9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.170e-37
Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKVQG 108
            V EEF+L +L KL T IPK ED+ WCGFL++Y++ YDR ST     L+R E KEFY VTTTDDPVIEKLA E  GNVFATD ILAHLMAS R+IYPWD+V QK+ G
Sbjct:  237 VAEEFDLVKLNKLTTAIPKGEDLLWCGFLDRYNDAYDRASTGRAIPLKRTENKEFYPVTTTDDPVIEKLAIEGSGNVFATDAILAHLMASARSIYPWDVVVQKLPG 342          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A8J5IV96_9STRA (FYVE domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IV96_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.620e-37
Identity = 64/104 (61.54%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            +V++FE+ QLTKLQ NIPK ED+KWCG L ++D  +DRI+++T  R+ R + ++FYYVTTTDDPVIE+LA +E+  VFATD ILAHLMA  R+++PWDIVAQ+V
Sbjct:  182 LVDQFEMQQLTKLQANIPKSEDLKWCGELREFDASFDRITSRTNTRVHRYDDRDFYYVTTTDDPVIEELAQQEQATVFATDAILAHLMACTRSVFPWDIVAQRV 285          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A3R7HU82_9STRA (Eukaryotic translation initiation factor 3 subunit D n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HU82_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.670e-37
Identity = 63/104 (60.58%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            ++E+FE+ QLTKLQTNIPK ED+KWCG L +YD  +DR+++++ +R+ R + ++FYYVTTTDDPVIEKLA +    VFATD IL+HLMA  R+++PWDIVAQ+V
Sbjct:  728 LIEQFEMQQLTKLQTNIPKTEDIKWCGELREYDATFDRLTSRSNKRVHRYDDRDFYYVTTTDDPVIEKLAQQGDATVFATDAILSHLMACTRSVFPWDIVAQRV 831          
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Match: A0A662Y561_9STRA (Eukaryotic translation initiation factor 3 subunit D n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y561_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.680e-37
Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    3 VVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQRCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWDIVAQKV 106
            +V++FE+ QLTKLQ NIPKVED+KWCG L +YD  +DRI+++T  R+ R + ++FYYVTTTDDPVIE+LA +    VFATD ILAHLMAS R+++ WDIVAQ+V
Sbjct:  189 LVDQFEMQQLTKLQVNIPKVEDLKWCGELREYDAAFDRITSRTSTRVHRYDDRDFYYVTTTDDPVIEELAQQGDATVFATDAILAHLMASTRSVFGWDIVAQRV 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188904.5185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNN8_ECTSI3.400e-5887.85Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U1Q148_9STRA1.870e-4774.04Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P6GGR6_9CRUS5.400e-4059.62Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z0I8_9STRA1.980e-3861.47Eukaryotic translation initiation factor 3 subunit... [more]
K3XBY3_GLOUD2.410e-3862.50Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2CZZ7_9STRA1.110e-3761.06Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1BPB9_9STRA3.170e-3766.98Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J5IV96_9STRA3.620e-3761.54FYVE domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3R7HU82_9STRA3.670e-3760.58Eukaryotic translation initiation factor 3 subunit... [more]
A0A662Y561_9STRA3.680e-3762.50Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007783Eukaryotic translation initiation factor 3 subunit DPFAMPF05091eIF-3_zetacoord: 2..108
e-value: 8.1E-41
score: 140.6
IPR007783Eukaryotic translation initiation factor 3 subunit DPANTHERPTHR12399EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7coord: 2..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188904contigH-elongata_contig188904:29..997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188904.5185.1mRNA_H-elongata_contig188904.5185.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188904 29..997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188904.5185.1 ID=prot_H-elongata_contig188904.5185.1|Name=mRNA_H-elongata_contig188904.5185.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MQVVEEFELPQLTKLQTNIPKVEDMKWCGFLEQYDEQYDRISTKTERRLQ
RCEKKEFYYVTTTDDPVIEKLAGEEKGNVFATDTILAHLMASPRTIYPWD
IVAQKVQGGTGALI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007783eIF3d