prot_H-elongata_contig18882.5181.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18882.5181.1
Unique Nameprot_H-elongata_contig18882.5181.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length518
Homology
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 1.490e-97
Identity = 169/248 (68.15%), Postives = 188/248 (75.81%), Query Frame = 0
Query:    1 MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANEN-PVGGSSSAGY---GLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPPLAAGLLRPDANSDAG-----GYAGGVQS-QWGLRDISKMRWPAW 238
            MKGHHLRSSLPRFP KKSKLWTNHGD+SFVE+RR+ALE Y KTLLQLPHVSTLDSTRAFLGMVGNLREFS+ W+GKELG  LKRAS +A     VGG+ SAG    G  PPVI S+ G+ +SPPGV PGDRLF+VNG+ TE MSLEAAWSS  RA+RPV+LHF GPI+RMDSTLAPLPEAFLR R P GR+  PS +  DGGPPLA   LRP  +  A      G AGGV   QW LR +     PAW
Sbjct:  102 MKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQ-LPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGML----PAW 344          
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 3.890e-97
Identity = 215/426 (50.47%), Postives = 255/426 (59.86%), Query Frame = 0
Query:    1 MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANEN-PVGGSSSAGY---GLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPPLAAGLLRPDANSDAGGYAGGVQ------SQWGLRDISKMRWPAWG-QRPDGISDAATGAENDAAAGLGRYRSSAKPPSG-GGGMPPGRAVGPFGDGAGAS---RSSPSSTSRLFGDAE---------GTAAEERQARSWRSPGDTGITGLHTSVWPLGGNPGGAGSRESSD-----WMPDMLIGGGKSSSSAPDAASRWAPSSQPSSAGSHTTTPTGRHPVA 397
            MKGHHLRSSLPRFP KKSKLWTNHGD+SFVE+RR+ALE Y KTLLQLPHVSTLDSTRAFLGMVGNLREFS+ W+GKELG  LKRAS +A     VGG+ SAG    G  PPVI S+ G+ +SPPGV  GDRLF+VNG+ TE MSLEAAWSS  RA+RPV+LHF GPI+RMDSTLAPLPEAFLR R P GR+  PS    DGGP LA   LRP  +  A               QW LR +     PAW  ++P    D +  A   +AA    +     P +  G G+  G AVGPFG+G GA+   R++P+++S   GDA          G A +E    SWRSP              L   PG +            WMPD   G G S+SS+P       P +   +AG+  T PT R  +A
Sbjct:  175 MKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQ-LPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGML----PAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTNPANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXXXXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSP-------PGNMLGAAGAVPTPPTSREELA 588          
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.290e-17
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    1 MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTL--KRASGIANENPVGGSSSAGYGLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDSTLA 171
            MKGHH+R  LP  PEK  K +T+H D SF++ R   LE +   +  +PHV  +   +AFLG++  +RE+S+ +    LG++L  +   G    +P              V+  IQ  +    GV PGD+L RVNG P +  +  AA +  K   RP+++HF   +I   +T A
Sbjct:  178 MKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDRQGEPGSSPC-------------VVGMIQKPEVCQ-GVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQ-VINASTTAA 335          
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.690e-16
Identity = 65/165 (39.39%), Postives = 85/165 (51.52%), Query Frame = 0
Query:    1 MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSAGYGLGPP--VIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKRASRPVLLHFFGPI 163
            MKGHHL  SLP  P K   L  +  D +F+E RR  L+ Y +TLL++PHV  LD+TRAFLG+VG+LRE S V  G   G      +G A    V      G GL  P   +   Q  + +P GV+ GD L RV G   E  SL       ++  +P L+H    +
Sbjct:  256 MKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRERSFVVSGGAAG---GGGAGFALTADV-----QGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410          
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.170e-15
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 0
Query:    2 KGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHVSTLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSAGYGLGPPVIASIQ----GSKKSPPGVSPGDRLFRVNGEP-TEFMSLEAAWSSFKRASRPVLLHFFGPIIRMDS 168
            KGHHLRSSLP  P ++ KL  +H D +FVE+RR  LE     LL +PHV  +   + FLG    L+E S+++  ++LG+++ R   +  E  +             V+  ++    G +KS   V  GD L +V GEP ++F   +       R  RP+++HF   + R  S
Sbjct:  168 KGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITRT--VVPEESI-------------VVTRVKEAGPGGQKSR--VMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS 322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18882.5181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMZ7_ECTSI1.490e-9768.15PX domain containing protein (Partial) (Fragment) ... [more]
A0A6H5JS20_9PHAE3.890e-9750.47PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S3M5K7_9STRA4.290e-1734.10Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835YSM5_9STRA1.690e-1639.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CLT8_9STRA2.170e-1533.14PX domain-containing protein n=3 Tax=Monodopsidace... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 1..65
e-value: 2.8E-7
score: 32.3
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 8..61
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..67
score: 8.896
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 52..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18882contigH-elongata_contig18882:1985..4324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18882.5181.1mRNA_H-elongata_contig18882.5181.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18882 1495..6137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18882.5181.1 ID=prot_H-elongata_contig18882.5181.1|Name=mRNA_H-elongata_contig18882.5181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=518bp
MKGHHLRSSLPRFPEKKSKLWTNHGDMSFVEQRRQALELYAKTLLQLPHV
STLDSTRAFLGMVGNLREFSIVWDGKELGMTLKRASGIANENPVGGSSSA
GYGLGPPVIASIQGSKKSPPGVSPGDRLFRVNGEPTEFMSLEAAWSSFKR
ASRPVLLHFFGPIIRMDSTLAPLPEAFLRRRGPEGRKGKPSLSGDDGGPP
LAAGLLRPDANSDAGGYAGGVQSQWGLRDISKMRWPAWGQRPDGISDAAT
GAENDAAAGLGRYRSSAKPPSGGGGMPPGRAVGPFGDGAGASRSSPSSTS
RLFGDAEGTAAEERQARSWRSPGDTGITGLHTSVWPLGGNPGGAGSRESS
DWMPDMLIGGGKSSSSAPDAASRWAPSSQPSSAGSHTTTPTGRHPVAPPE
WLTGAGARDSRETRGLISGKSAMARDRPNATGGVLLGDGEAERSKVGEER
FGERHSSVKETTGTFGSRQRNGKTPEGPLSSPFGELGYGGAATRPFAGSA
FGEAVAVDEEDEENPFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox
IPR036034PDZ_sf