prot_H-elongata_contig188776.5180.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188776.5180.1
Unique Nameprot_H-elongata_contig188776.5180.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 5.610e-13
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 PIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSIIASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMW 87
            P K+LGE  ++LGC I+RDR AG I   Q  YI  + ERF + +TS I +       S ++  ++  E E+   +P+RE+ G LMW
Sbjct:   94 PTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMW 172          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A060SV79_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SV79_PYCCI)

HSP 1 Score: 70.1 bits (170), Expect = 4.350e-12
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSIIAS-VAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            + + DLG  S+ LG  I+RD  AG ++  QH YI  +  RF  T    +++ +   +  SK+  P++ AEV +MR +PYRE   ALM+A
Sbjct:  881 YKLTDLGPVSWLLGIKISRDLTAGTLSLSQHAYIDALLARFNFTDLKPVSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAISALMYA 969          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 69.7 bits (169), Expect = 5.970e-12
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSIIAS-VAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            + I DLG  S+ LG  I+ D  AG ++  QH YI  +  RF  T    ++  +   +  SK+  P++ AEV +MR +PYRE  GALM+A
Sbjct: 1019 YKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYA 1107          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A4Y9XV14_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XV14_9AGAM)

HSP 1 Score: 69.3 bits (168), Expect = 7.800e-12
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTK-TSIIASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMW 87
            F ++DLGE SY LG HITRDR    +   Q +YI  M ER+ + + T +   +  G   SK+ SP TD E E+M  +PY    G+L++
Sbjct:  219 FKLRDLGETSYLLGIHITRDRGQHRLYLSQRKYILEMLERYHMGECTPVTTPMDPGLRLSKAMSPATDEEREEMAGVPYINAVGSLLY 306          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A4Y9YCU4_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YCU4_9AGAM)

HSP 1 Score: 69.3 bits (168), Expect = 7.980e-12
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTK-TSIIASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMW 87
            F ++DLGE SY LG HITRDR    +   Q +YI  M ER+ + + T +   +  G   SK+ SP TD E E+M  +PY    G+L++
Sbjct:  440 FKLRDLGETSYLLGIHITRDRGQHRLYLSQRKYILEMLERYHMGECTPVTTPMDPGLRLSKAMSPATDEEREEMAGVPYINAVGSLLY 527          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI)

HSP 1 Score: 68.2 bits (165), Expect = 1.230e-11
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    3 IKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSIIAS-VAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            + DLG  S+ LG  I+RD  AG  +  QH YI  +  RF  T    +++ +   +  SK+  P++ AEV +MR +PYRE  G LM+A
Sbjct:    1 MTDLGPVSWLLGIKISRDLEAGTFSLSQHAYIDALLARFNFTDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYA 87          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 68.2 bits (165), Expect = 2.080e-11
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGV--TKTSIIASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            F +KDLGEASY LG  I RDR+   +   Q  YI  +  RF +  +K   I  ++ G   SK+ SP TD E ++MR IPY    G++M+A
Sbjct:  988 FSMKDLGEASYILGIRIYRDRSQRLLGLSQGTYIDKVLRRFNMHESKKGFIP-MSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYA 1076          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A4Y9XV77_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XV77_9AGAM)

HSP 1 Score: 67.8 bits (164), Expect = 2.770e-11
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTK-TSIIASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMW 87
            F ++DLGE SY LG HITRDR    +   Q +YI  M E++ + + T +   +  G   SK+ SP TD E E+M  +PY    G+L++
Sbjct:  199 FKLRDLGETSYLLGIHITRDRGQHRLYLSQRKYILEMLEQYHMGECTPVTTPMDPGLRLSKAMSPATDEEREEMAGVPYINAVGSLLY 286          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: UPI000F102BE3 (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI000F102BE3)

HSP 1 Score: 65.5 bits (158), Expect = 4.560e-11
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSI-IASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            F +KDLGEA+Y LG  I RDR+   I   Q  Y+  + ++F +  +      V  G   SK+ SP T A+ EKM ++PY    G+LM+A
Sbjct:  103 FSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGMRLSKTQSPTTAADREKMSYVPYASAVGSLMYA 191          
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Match: A0A535F025_9CHLR (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F025_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 1.350e-10
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSI-IASVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA 88
            F +KDLGEA++ LG  I RDR    +   Q QYI  + +RF + ++         G   SKS SPQTD E +KM   PY    G++M+A
Sbjct: 1041 FSMKDLGEANFVLGIKIFRDRTKRLLGLSQAQYIDKIVKRFNLEESKRGYLPERHGVVLSKSMSPQTDEERQKMEQTPYASAMGSIMYA 1129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188776.5180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRE7_9PHAE5.610e-1339.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SV79_PYCCI4.350e-1238.20Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A060SPD4_PYCCI5.970e-1239.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XV14_9AGAM7.800e-1240.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9YCU4_9AGAM7.980e-1240.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S8R4_PYCCI1.230e-1139.08Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A396GW39_MEDTR2.080e-1142.22Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A4Y9XV77_9AGAM2.770e-1139.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000F102BE34.560e-1139.33hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
A0A535F025_9CHLR1.350e-1040.45DDE-type integrase/transposase/recombinase (Fragme... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188776contigH-elongata_contig188776:56..319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188776.5180.1mRNA_H-elongata_contig188776.5180.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188776 56..319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188776.5180.1 ID=prot_H-elongata_contig188776.5180.1|Name=mRNA_H-elongata_contig188776.5180.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
FPIKDLGEASYYLGCHITRDRNAGPITFDQHQYIHTMAERFGVTKTSIIA
SVAGGKAFSKSDSPQTDAEVEKMRHIPYREIFGALMWA
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