prot_H-elongata_contig188619.5167.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188619.5167.1
Unique Nameprot_H-elongata_contig188619.5167.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig188619.5167.1 vs. uniprot
Match: D8LH12_ECTSI (Zn-dependent peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.490e-21
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MMETGTSKVDRVQLSRRIGSQTGGVYATFMTAQPFKDGVVSDPGALKQFLFLRGK 55
            MMETGTS++DRVQLSRRIGSQTGGVYATF+  QP   G V+DPGALKQ+LFLRGK
Sbjct:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGK 55          
BLAST of mRNA_H-elongata_contig188619.5167.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.240e-21
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MMETGTSKVDRVQLSRRIGSQTGGVYATFMTAQPFKDGVVSDPGALKQFLFLRGK 55
            MMETGTSK+DRVQLSRRIGSQTGG+YATF+  QP   G V+DPGALKQ+LFLRGK
Sbjct:  669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGK 723          
BLAST of mRNA_H-elongata_contig188619.5167.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.040e-6
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 MMETGTSKVDRVQLSRRIGSQTGGVYATFMTAQPFKDG-VVSDPGALKQFLFLRGK 55
            ++ETG   +DRV+L+R IG+QTGGVY T +T      G V++    +  +LFLRGK
Sbjct:  658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGK 713          
BLAST of mRNA_H-elongata_contig188619.5167.1 vs. uniprot
Match: A0A7S0AYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYE3_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 8.910e-5
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 MMETGTSKVDRVQLSRRIGSQTGGVYATFMTA----QPFKDGVVSDPGALKQFLFLRG 54
            MMETG   +D V LSRRIG+ TGGV A+FM++    +  ++GVVS+   +   + ++G
Sbjct:   89 MMETGAGDLDSVALSRRIGTYTGGVSASFMSSGVKPEGAEEGVVSEGNHMVTQIMIQG 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188619.5167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH12_ECTSI1.490e-2180.00Zn-dependent peptidase (Partial) (Fragment) n=1 Ta... [more]
A0A6H5LB25_9PHAE8.240e-2180.00M16C_associated domain-containing protein n=1 Tax=... [more]
A0A835YY54_9STRA1.040e-646.43Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A7S0AYE3_9STRA8.910e-543.10Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188619contigH-elongata_contig188619:192..356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188619.5167.1mRNA_H-elongata_contig188619.5167.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188619 192..356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188619.5167.1 ID=prot_H-elongata_contig188619.5167.1|Name=mRNA_H-elongata_contig188619.5167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MMETGTSKVDRVQLSRRIGSQTGGVYATFMTAQPFKDGVVSDPGALKQFL
FLRGK
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